Related by context. All words. (Click for frequent words.) 74 retrotransposons 71 transposons 68 Alu elements 66 transposon 65 A. thaliana 65 noncoding 65 retrotransposon 65 mitochondrial gene 65 heterochromatin 64 transposable element 64 noncoding RNAs 64 intron 63 mammalian genomes 63 paralogs 63 Transposons 63 centromeres 63 segmental duplications 63 cDNAs 63 telomeric 62 introns 62 transgene 62 non coding RNA 62 centromere 62 metazoan 61 mRNA transcripts 61 homologs 61 micro RNAs 61 piRNAs 61 morphogen 61 intergenic 61 heterochromatic 61 ciliated 61 chromosomal rearrangements 61 KIAA# 61 ribosomal DNA 61 ribonucleic acid RNA 61 RNAs 60 myosin VI 60 untranslated regions 60 contigs 60 polyploid 60 yeast genome 60 structural rearrangements 60 D. melanogaster 60 polypeptide 60 mosaicism 60 indels 60 Hox gene 60 amino acid residues 60 non coding RNAs 60 eukaryote 60 centrosomes 60 nucleosomes 60 glycoproteins 60 tetramers 60 euchromatin 60 clonal 60 RNA molecules 60 exons 60 eukaryotic cell 60 small RNAs 60 eukaryotic cells 60 imprinted genes 60 Arabidopsis genome 59 archaeal 59 QTLs 59 #S rRNA 59 nucleotide sequence 59 maternally inherited 59 tRNAs 59 DSBs 59 indel 59 T. brucei 59 RNA strands 59 Ubx 59 microsatellite markers 59 centromeric 59 ncRNAs 59 disulfide bond 59 V3 loop 59 fission yeast 59 nucleosome 59 viral genome 59 DNMT1 59 rRNA 59 alternatively spliced 59 sequence homology 59 RNA sequences 59 transgenes 59 RNA transcripts 59 coding exons 59 synuclein 59 amino acid sequences 59 somatic stem cells 59 somatic mutations 59 exonuclease 59 gene duplications 59 subfamilies 59 phenotypic variation 58 proteins 58 uPAR 58 microRNA molecules 58 plastid 58 3'UTR 58 PKD1 58 Argonaute proteins 58 cohesin 58 kilobase 58 RNA polymerase II 58 globin genes 58 chromosomal DNA 58 chloroplast 58 HOTAIR 58 mRNA molecules 58 Chromosomes 58 prokaryotes 58 KLF4 58 microcephalin 58 transcriptomes 58 genes encoding 58 loxP 58 lysine residues 58 polypeptides 58 endogenous retroviruses 58 splice junctions 58 Hsp# [001] 58 genes 58 cDNA library 58 ribosomal RNA 58 DNA sequences 58 DNA transposons 58 genomic rearrangements 58 outcrossing 58 Volvox 58 zebrafish genome 58 MLL gene 58 genetic loci 58 protein complexes 58 cDNA libraries 58 centrosome 58 sequenced genomes 58 endonuclease 58 clathrin 58 #S rDNA 57 cytochrome b 57 mutations 57 nucleotide 57 colugos 57 histone modifications 57 nucleolar 57 MALAT1 57 polymerases 57 PrP 57 RNA polymerases 57 intronic 57 major histocompatibility complex 57 germline mutations 57 lincRNAs 57 prokaryote 57 palladin 57 CpG islands 57 transmembrane domains 57 neural crest cells 57 nucleotide sequences 57 histone protein 57 missense mutations 57 L1 retrotransposons 57 nucleolus 57 cilium 57 noncoding RNA 57 TAp# 57 glycan 57 CTCF 57 subunits 57 homodimers 57 trypanosome 57 LRRK2 gene 57 DLC1 57 Drosophila genome 57 genomic sequence 57 introgression 57 fluorescently tagged 57 miRNAs 57 CPEB 57 conserved sequences 57 constitutively 57 PAX5 57 biogenesis 57 MHC proteins 57 polyglutamine 57 RecA 57 VNTR 57 rDNA 57 polyploidy 57 phylogenetically 57 lincRNA 57 Single Nucleotide Polymorphisms SNPs 57 CRISPR 57 ribozyme 57 kinesin motor 57 RNA molecule 57 ERK2 57 fibronectin 57 Pax6 57 Dictyostelium 57 Nup# 57 uracil 57 granule cells 57 cyclin B1 57 meiotic recombination 57 CXCL5 57 membrane protein 57 orthologous genes 57 short hairpin RNA 57 ribonucleic acids 57 coexpression 57 virulence genes 57 chromosomal regions 57 NPC1 57 tRNA synthetase 57 BAC clones 57 plastids 57 huntingtin 57 fascin 57 CpG 56 linkage disequilibrium 56 demethylase 56 homozygosity 56 gambiae 56 ultraconserved 56 mutant protein 56 monophyletic 56 Jhdm2a 56 posttranslational modifications 56 epigenetic modification 56 superfamily 56 intergenic regions 56 germline stem cell 56 mutant proteins 56 histone 56 actin filaments 56 quantitative trait loci 56 subgenus 56 neurones 56 primary cilium 56 eukaryotic organisms 56 VHL gene 56 erythrocytes 56 AMPA receptors 56 MSH2 56 endosymbiosis 56 eukaryotic 56 tetramer 56 haplotypes 56 NF1 gene 56 nucleotides 56 clonally 56 Transcriptome 56 defensins 56 HLA genes 56 budding yeast 56 Hox genes 56 selfing 56 defensin 56 calpain 56 Arabidopsis plants 56 normal prion protein 56 H2AX 56 microdeletions 56 vacuoles 56 viroid 56 segmental duplication 56 fungal genomes 56 tRNA 56 noncoding DNA 56 ligases 56 primary cilia 56 micro RNA 56 Foxp3 56 Tribolium 56 genomic instability 56 substrate specificity 56 mitochondrial genome 56 biosynthetic pathway 56 dimeric 56 unicellular 56 microRNAs miRNAs 56 ABCB1 gene 56 L1s 56 globin gene 56 short hairpin RNAs 56 phylogenies 56 cytoplasmic domain 56 metazoans 56 maize genome 56 Cre recombinase 56 PTPN# 56 piggyBac 56 C. neoformans 56 organelle 56 transcription factors 56 E3 ligase 56 Gag protein 56 Golgi apparatus 56 Anopheles gambiae 56 cyclin E 56 genetic recombination 56 soluble proteins 56 telomerase RNA 56 transfected cells 56 P. infestans 56 eukaryotic genomes 56 riboswitches 56 Rap1 56 olfactory receptor 56 MT1 MMP 56 phylogenetic trees 56 primordial germ cells 56 fruitflies 56 coding sequences 56 organism genome 56 overexpressing 56 mutagenesis 56 Supplementary Fig 56 pseudogenes 56 mitochondrial DNA mtDNA 56 mutant worms 56 histone H4 56 subcellular compartments 56 MHC molecules 56 operons 56 bacterial genomes 55 prokaryotic 55 poly dA 55 outer membrane proteins 55 oligomeric 55 histone modification 55 endocytic 55 spontaneous mutations 55 positional cloning 55 CHD5 55 ribosomal protein 55 UTRs 55 outbred 55 extracellular domains 55 chloroplast genome 55 trypanosomes 55 mutational 55 symbiont 55 TRF1 55 endonucleases 55 chromosomes 55 JAK STAT 55 Arabidopsis genes 55 mitochondrial mutations 55 myosin 55 globin 55 viral RNA 55 kinome 55 shRNAs 55 ncRNA 55 X inactivation 55 RNA splicing 55 fruiting bodies 55 germline cells 55 adduct 55 PrPSc 55 vesicle 55 PGCs 55 hypermethylated 55 c Myb 55 ubiquitination 55 primate genomes 55 phagocytes 55 cis regulatory 55 coding genes 55 glycolipids 55 mammary stem cells 55 presenilin 55 mammalian genome 55 coding RNA 55 lectin 55 MAPK pathway 55 Htt 55 eusocial 55 TP# gene 55 isoleucine 55 mRNAs 55 adenine 55 syntaxin 55 proteases 55 genome 55 actin binding 55 3' 55 recombination hotspots 55 proline rich 55 DLX5 55 H#Y 55 mutant allele 55 transmembrane 55 ssDNA 55 DISC1 55 Drosophila 55 SVZ 55 phytochrome 55 proteasomes 55 suppressor gene 55 provirus 55 orthologs 55 miRNA genes 55 RNA strand 55 insulin signaling pathway 55 mutant alleles 55 Skp2 55 protein fragment 55 PcG proteins 55 interneurons 55 LIS1 55 serine 55 retroviruses 55 gene 55 FUS1 55 prion gene 55 translocations 55 epistasis 55 chromosomal rearrangement 55 trinucleotide 55 Dynein 55 cysteine residues 55 tumor suppressor protein 55 PTEN gene 55 sexually reproducing 55 glycosyltransferase 55 ortholog 55 cysteines 55 microRNAs 55 F actin 55 TEP1 55 alpha helices 55 Dpp 55 epigenetic modifications 55 TRIM5 55 BARD1 55 cytoplasmic 55 protein encoded 55 sphingolipid 55 presynaptic 55 miR# 55 TGF ß 55 reprogramming genes 55 deleterious mutations 55 haploid 55 Fig. 1A 55 de novo mutations 55 H#K#me# 54 Phytophthora species 54 At#g# 54 constitutively active 54 histone H3 54 kinase domain 54 homology 54 apoE4 54 M. genitalium 54 gene deletions 54 P. patens 54 amino acid alanine 54 coiled coil 54 ultraconserved elements 54 hippocampal neurons 54 MLH1 54 epigenetic silencing 54 deletion mutant 54 BRAF protein 54 ChR2 54 transcriptome 54 mtDNA mutations 54 neural crest 54 phylogeny 54 stromal cells 54 subcellular localization 54 HLA molecules 54 phosphorylated proteins 54 DNA strands 54 replicase 54 viral genomes 54 helices 54 genomic loci 54 IGF2 54 #p# [003] 54 sRNA 54 RNA viruses 54 superior colliculus 54 bacterial genome 54 dimers 54 orthologous 54 histone proteins 54 glycosylation 54 Prevotella 54 dopamine transporter gene 54 microsporidia 54 chromosomal 54 nucleotide substitutions 54 clades 54 ubiquitylation 54 5 hydroxymethylcytosine 54 CRISPR Cas 54 proto oncogene 54 Pol IV 54 multiprotein complex 54 vacuolar 54 MeCP2 gene 54 actin 54 TET2 54 DNA polymerase 54 Arabidopsis thaliana 54 C#Y 54 Drosophila melanogaster 54 PKM2 54 receptor molecule 54 dsRNA 54 antisense RNA 54 fig. S4 54 nematode worms 54 transcriptional machinery 54 inbred strains 54 protist 54 uncharacterized 54 cell cytoplasm 54 splice variant 54 extracellular domain 54 homologous 54 anti microbial peptides 54 Sonic Hedgehog 54 dendrite 54 Cdc# 54 amyloids 54 fibril 54 Phylogenetic 54 centrioles 54 huntingtin protein 54 RUNX3 54 microRNA molecule 54 distinct lineages 54 radial glia 54 FGFs 54 yeast Saccharomyces cerevisiae 54 disulfide bonds 54 methylation patterns 54 E cadherin 54 Polycomb 54 DEAR1 54 CGG repeats 54 ARF1 54 GFP gene 54 methylated DNA 54 protein coding 54 proteins encoded 54 Dicer enzyme 54 RhoA 54 cdk5 54 histones 54 receptor subunit 54 neuroblasts 54 chromatin proteins 54 transmembrane proteins 54 polymorphisms 54 gene sequences 54 peroxisome 54 ALDH2 54 cytosolic 54 deacetylation 54 #S rRNA gene 54 trimers 54 Wolbachia 54 RNAP 54 genetic lineages 54 Xenopus laevis 54 MECP2 gene 54 progerin 54 Trypanosoma brucei 54 caveolae 54 phagocyte 54 mitochondrial proteins 54 alleles 54 gene locus 54 epigenetically 54 GTPase 54 H#K# methylation 54 transmembrane receptor 54 effector molecules 54 recombinase 54 unicellular organisms 54 X. laevis 54 conformational 54 supramolecular 54 enzymatically active 54 synaptic vesicles 54 trimeric 54 synthetases 54 chlorophylls 54 microdeletion 54 chromosomal translocations 54 kinesins 54 transcriptome sequencing 54 dinucleotide 54 DNA polymerases 54 X chromosome inactivation 54 site directed mutagenesis 54 mitochondrial genomes 54 protein tyrosine kinase 54 chordates 54 HtrA2 54 codons 54 nucleoli 54 S. cerevisiae 54 gene rearrangements 54 acetylated 54 Argonaute 54 homologous chromosomes 54 cellulases 54 monocots 54 Plasmodium 54 ribosomal proteins 54 nucleosome positioning 54 chromosomal instability 54 Vps# 54 MEF2 54 STAT4 54 multivesicular bodies 54 vesicle fusion 54 subventricular zone 54 mammalian organisms 54 acetyl groups 54 lysates 54 phosphatases 54 plant Arabidopsis thaliana 54 transcriptionally 54 3' UTR 54 isoforms 54 striated muscle 53 hypervariable 53 neurites 53 HDACs 53 microglial cells 53 Apobec3 53 nucleotide substitution 53 chromosome 53 haplogroups 53 retinal neurons 53 mutation 53 heterozygosity 53 striatal 53 CCR7 53 lamin 53 molecules 53 PALB2 53 #BP# 53 activin 53 OCA2 53 organelles 53 abnormal proteins 53 dynamin 53 p# mutations 53 astrocytic 53 MiRNAs 53 MAPKs 53 Rickettsia 53 protein 53 DQB1 * 53 cellular organelles 53 glycosylated 53 tubule 53 ploidy 53 heterozygotes 53 titin 53 phenotypic traits 53 melanocyte 53 evolutionarily conserved 53 TERT 53 kinase gene 53 var genes 53 EZH2 53 aminoacyl tRNA synthetases 53 catenin 53 SGK1 53 germline stem cells 53 germline 53 allelic 53 viral proteins 53 antigen binding 53 SETDB1 53 DNA demethylation 53 CD1d 53 S. enterica 53 transgenic mice expressing 53 gene encoding 53 transcriptional repressor 53 mutant genes 53 RNA genome 53 ribozymes 53 ZNF# 53 SATB1 53 flagellum 53 Wnts 53 Salk researchers 53 protein subunits 53 Trichoplax 53 gp# [002] 53 HDAC6 53 cadherin 53 ATPase 53 FMR1 gene 53 cofilin 53 hexose 53 antisense molecules 53 commensal bacteria 53 bacterium Escherichia coli 53 PAK1 53 Deinococcus 53 PON1 53 evolvability 53 paternally inherited 53 synteny 53 sarcomere 53 mammalian cells 53 Wnt proteins 53 goblet cells 53 epigenetic marks 53 Rad# 53 protists 53 CD8 cells 53 genetic alterations 53 tetherin 53 Amborella 53 ChIP seq 53 amino acid substitutions 53 peptides 53 mtDNA 53 MDMX 53 Amino acid 53 transcriptional regulation 53 telomere DNA 53 NR2B subunit 53 spontaneous mutation 53 KLF# 53 mouse embryonic fibroblasts 53 motile 53 synapse formation 53 HLA G 53 beta amyloid peptides 53 hypermethylation 53 6S RNA 53 Fig. 1C 53 pseudogene 53 Caenorhabditis elegans 53 sialic acids 53 receptor ligand 53 c myc 53 lacZ 53 cell adhesion molecules 53 mutated protein 53 chimeric gene 53 E#F# 53 mutant mouse 53 HAR1 53 Aβ 53 pea aphid 53 T. gondii 53 replisome 53 transcriptionally active 53 TRIM5 alpha 53 FGF signaling 53 artificial chromosomes 53 invadopodia 53 Notch receptor 53 ABCA1 53 placental mammals 53 antibiotic resistance genes 53 Chlamydomonas 53 perilipin 53 hemagglutinin gene 53 beta1 integrin 53 cell nuclei 53 serine threonine kinase 53 OGG1 53 misfolded protein 53 transporter proteins 53 cofactors 53 carboxy terminal 53 antibody antigen 53 proteosome 53 telomeric DNA 53 genomic deletions 53 causative genes 53 distantly related species 53 molecular scissors 53 phagocytosis 53 klotho 53 SH#B# 53 serine protease 53 SUMOylation 53 miRNA 53 immunodominant 53 glycolipid 53 gene amplification 53 deuterostomes 53 sexually dimorphic 53 Skeletal muscle 53 constitutively expressed 53 NFKBIA 53 Fig. 1c 53 homodimer 53 histone acetylation 53 chitinase 53 ribonucleic acid molecules 53 gametophyte 53 cathepsins 53 phosphatidylinositol 53 condensin 53 chromosomal translocation 53 splice variants 53 quasispecies 53 HMGA2 53 hTERT 53 rRNA genes 53 V. cholerae 53 phenotypic differences 53 lactase persistence 53 condensin II 53 microbiomes 53 oligomerization 53 forkhead 53 PIK3CA 53 interfering RNA 53 zebrafish embryo 53 yeast cells 53 vimentin 53 transmembrane protein 53 germ cells 53 Rb#/p# 53 Purkinje cell 53 lipid membrane 53 AMACR 53 leukocytes 53 ribonuclease 53 GSTM1 gene 53 MDCK cells 53 ubiquitin ligase 53 downregulated 53 haplotype 53 secretase 53 epigenetic regulation 53 single nucleotide polymorphism 53 MDSCs 53 morphogens 53 dendritic 53 p#/CBP 53 glycans 53 PER2 53 excitatory neurons 53 MC4R gene 53 paxillin 53 methyltransferase 53 melanosomes 53 RNA ribonucleic acid 53 cyanobacterial 53 cardiac fibroblasts 53 neural progenitor 52 phosphatase 52 Wnt signaling 52 PIP2 52 evolutionary lineage 52 homologues 52 epigenetic alterations 52 planarian 52 transfer RNA tRNA 52 TGF β 52 Enterobacter 52 punctate 52 intestinal epithelial cells 52 cnidarians 52 ribosomal RNA rRNA 52 eIF2 52 tRNA genes 52 Xenopus 52 Pten 52 intramolecular 52 cDNA 52 exon 52 oligosaccharide 52 nucleolar dominance 52 messenger RNAs 52 GNAQ 52 Nanog 52 EphB4 52 glycoprotein 52 mutant SOD1 52 EBNA1 52 laforin 52 acetylation 52 macromolecule 52 coevolution 52 prion proteins 52 Wwox 52 cathepsin B 52 EGFP 52 odorant receptor 52 Caulobacter crescentus 52 microvilli 52 neuronal stem cells 52 GluR1 52 biological molecules 52 proline 52 inhibitory receptor 52 homologous recombination 52 mouse ESCs 52 cryptochrome 52 abnormal prions 52 fruitfly 52 guanine G 52 messenger RNAs mRNAs 52 Rab# 52 microtubule 52 small RNAs encoded 52 hematopoietic cells 52 Pten gene 52 apical membrane 52 STK# [002] 52 molecule 52 fibrils 52 poxviruses 52 Fig. 1D 52 transcriptomics 52 bacteria Escherichia coli 52 operon 52 #S subunit 52 genomic alterations 52 lectins 52 fluorescent molecules 52 S. pombe 52 primordia 52 homolog 52 CpG island 52 adult neurogenesis 52 MC4R 52 neurons 52 metalloprotease 52 metabolizing enzymes 52 PHLPP 52 peroxisomes 52 endosomes 52 miRNA expression 52 acetyl CoA 52 hydrolase 52 RNA polymerase 52 ephrin 52 antigenic epitopes 52 telomerase reverse transcriptase 52 A. gambiae 52 bacterial enzyme 52 SRY gene 52 Cx# [001] 52 ubiquitin 52 epidermal cells 52 COL#A# 52 spindle fibers 52 Fanconi proteins 52 teosinte 52 Tetrahymena 52 myosins 52 olfactory receptors 52 c Src 52 chromosomal aberrations 52 Archaea 52 chloroplasts 52 somatic mutation 52 excitatory synapses 52 ciliates 52 beta globin 52 nucleic 52 angiosperm 52 dopamine receptor 52 green alga Chlamydomonas 52 TEL AML1 52 neurite outgrowth 52 midgut 52 synthases 52 BMP signaling 52 secreted proteins 52 membrane lipids 52 alpha synuclein gene 52 missense mutation 52 ras gene 52 acinar 52 tumor suppressor gene 52 fusion protein 52 endosymbiont 52 myosin II 52 TFIIH