Related by context. All words. (Click for frequent words.) 73 proteomes 72 transcriptome 70 quantitative trait loci 70 #S rRNA 70 Drosophila genome 69 transcriptome analysis 69 miRNA sequences 69 splice variants 69 #S rRNA gene 69 cDNA microarray 68 microsatellite markers 68 orthologs 68 miRNA expression 68 ncRNA 68 nucleotide sequences 68 methylation patterns 68 cDNA libraries 68 genomic sequence 68 RNA seq 68 sequenced genomes 68 mRNA transcripts 68 metazoan 68 #S rDNA 68 paralogs 68 sequence homology 67 splice junctions 67 putative biomarkers 67 fungal genomes 67 phylogenetic analyzes 67 A. thaliana 67 QTLs 67 yeast genome 67 nucleotide sequence 67 BAC clones 67 mitochondrial genomes 67 transcriptome profiling 67 subcellular compartments 67 differentially expressed genes 67 bacterial genomes 67 quantitative RT PCR 67 proteome 67 primate genomes 67 transcriptome sequencing 67 Arabidopsis genes 67 metazoans 67 genomic loci 67 malaria parasite genome 67 RNA sequences 66 mitochondrial genome 66 DNA demethylation 66 mitochondrial gene 66 cDNAs 66 microarray experiments 66 indel 66 genome annotation 66 non coding RNA 66 mitochondrial DNA mtDNA 66 contigs 66 transcriptomics 66 rRNA 66 coding exons 66 microRNA expression 66 phenotypic traits 66 Transcriptome 66 ChIP Seq 66 ChIP chip 66 5 hmC 66 clonally 66 comparative genomic 65 quantitative proteomics 65 array CGH 65 transcriptomic 65 Deinococcus 65 methylated DNA 65 bovine genome 65 genotyping arrays 65 sequenced genome 65 chloroplast genome 65 ncRNAs 65 metagenomic 65 genome sequences 65 somatic mutations 65 histone modification 65 amino acid sequences 65 RNA polymerases 65 intergenic 65 cDNA library 65 bisulfite sequencing 65 ChIP seq 65 kinome 65 phenotyping 65 oligonucleotide microarray 65 chromosomal regions 65 metabolome 65 introgression 65 Jhdm2a 64 virulence genes 64 Sanger sequencing 64 organism genome 64 phenotypic variation 64 intergenic regions 64 DNA sequences 64 transcriptional regulation 64 evolutionary relatedness 64 multigene 64 missense mutations 64 microRNAs miRNAs 64 differential gene expression 64 gene expression profiles 64 coding sequences 64 interactome 64 homologies 64 maize genome 64 genetic loci 64 noncoding RNA 64 X. laevis 64 gene expression patterns 64 DNA methylation patterns 64 microarray analysis 64 mammalian genomes 64 eukaryotic 64 genomic variation 64 nucleotide substitutions 64 haplotype map 64 coexpression 64 mRNA molecules 64 eukaryotic genomes 64 prokaryotic 64 noncoding RNAs 64 ortholog 64 Xenopus laevis 64 lysates 64 biochemical assays 64 zebra finch genome 64 comparative genomics 64 body louse genome 64 histone modifications 64 gene loci 64 genomewide 64 fission yeast 63 evolvability 63 cytochrome b 63 UTRs 63 homologues 63 miRNA 63 Alu elements 63 amplicons 63 subcellular localization 63 transfection efficiency 63 exome 63 epigenomic 63 homology 63 viral genomes 63 RNA Seq 63 qRT PCR 63 genomic proteomic 63 transgene expression 63 gene sequences 63 orthologous genes 63 ChIP 63 coding genes 63 miRNAs 63 functional annotation 63 chromatin immunoprecipitation ChIP 63 RNA transcripts 63 synteny 63 micro RNA 63 vertebrate genomes 63 orthologous 63 cis regulatory 63 ribosomal RNA rRNA 63 amplicon 63 mRNA sequences 63 Dictyostelium 63 genomes 63 previously undescribed 63 phylogenies 63 cDNA 63 PrPSc 63 constitutively expressed 63 ciliated 63 Gene Ontology terms 63 proteomic analyzes 63 chromatin immunoprecipitation 63 gene expression 63 aCGH 63 pyrosequencing 63 proteomic analysis 63 Chlamydomonas 62 protein isoforms 62 substrate specificity 62 polyploid 62 phenotypic expression 62 globin genes 62 miRNA molecules 62 noncoding 62 genome microarray 62 bioinformatic analysis 62 microarray gene expression 62 tumor biopsies 62 fruitfly Drosophila 62 RefSeq 62 genotypic 62 Gene Ontology 62 transcriptional profiling 62 maternally inherited 62 metagenome 62 metagenomes 62 genome rearrangements 62 eukaryotic organisms 62 ultrastructural 62 autosomal 62 comparative genomic hybridization CGH 62 comparative genomic analysis 62 microbial genomes 62 gene expression assays 62 Supplementary Fig 62 eukaryotic cell 62 FGF signaling 62 Phylogenetic analysis 62 Xenopus 62 druggable targets 62 miRNA profiling 62 genomic sequences 62 phenotypic differences 62 epigenetic modification 62 untranslated regions 62 T. brucei 62 Streptomyces bacteria 62 diploid genome 62 ribosomal proteins 62 alternatively spliced 62 splice variant 62 chromosomal DNA 62 #T# L1 62 zebrafish Danio rerio 62 HybSelect 62 genomic alterations 62 linkage disequilibrium 62 gene rearrangements 62 nucleated cells 62 paraffin embedded tissue 62 microarray datasets 62 Phenotypic 62 phenotypes 62 operons 62 experimentally validated 62 drosophila 62 Drosha 61 amphioxus 61 antibody antigen 61 genomic 61 enterotypes 61 Drosophila embryos 61 isotype 61 V3 loop 61 genome 61 cell lysate 61 tumorigenicity 61 PCR primers 61 metabolomic 61 morphological characteristics 61 single celled yeast 61 mutant allele 61 archaeal 61 oligonucleotide microarrays 61 indels 61 microRNA molecules 61 carboxyl terminal 61 ESTs 61 Sanger Sequencing 61 haploid 61 chordates 61 phylogenetic trees 61 genetic recombination 61 evolutionary lineage 61 linkage disequilibrium LD 61 kilobase 61 phenotypic 61 Arabidopsis genome 61 microRNA biomarkers 61 hybridizations 61 homozygosity 61 exosome 61 short hairpin RNAs 61 ribosomal DNA 61 microbiomes 61 inbred strains 61 chimpanzee genomes 61 intronic 61 gene expression microarray 61 P cadherin 61 glycan 61 metabolomic profiles 61 yeast Saccharomyces cerevisiae 61 prion strains 61 lacZ 61 supertree 61 bacterial symbiont 61 spontaneous mutations 61 P. patens 61 TLE3 61 FFPE tissues 61 operon 61 genomic profiling 61 multiplex assay 61 SNP genotyping 61 CpG island 61 hematopoietic progenitor cells 61 megabases 61 MAPK pathway 61 gene annotation 61 endosymbiont 61 phylogenetically 61 4E BP1 61 SNP arrays 60 formalin fixed paraffin embedded 60 RFLP 60 extracellular domains 60 quantitative PCR 60 epistasis 60 comparative genomic hybridization 60 HOTAIR 60 messenger RNAs 60 post translational modifications 60 genomic DNA 60 CD1d 60 tyrosine phosphorylation 60 5 methylcytosine 60 protein conformation 60 3'UTR 60 nucleotide substitution 60 cellularity 60 recombination hotspots 60 RRM1 60 situ hybridization 60 mammalian genome 60 deletion mutant 60 phylogeny 60 toxicogenomic 60 loci 60 eukaryote 60 genomic sequencing 60 RT qPCR 60 transgenic rats 60 genes differentially expressed 60 DNA microarrays 60 de novo mutations 60 bioinformatic 60 immunoprecipitation 60 heritable traits 60 Apobec3 60 C. neoformans 60 cellulases 60 Prevotella 60 exonuclease 60 TaqMan assays 60 human proteome 60 primordial germ cells 60 microbiota 60 #S rRNA genes 60 ribonucleic acid RNA 60 outer membrane proteins 60 segmental duplications 60 polyadenylation 60 Haplotype 60 amino acid residues 60 siRNA knockdown 60 miRNA genes 60 transfected cells 60 conserved sequences 60 diploid 60 TMPRSS2 ERG 60 exons 60 mammalian organisms 60 mRNA expression 60 oligonucleotide probes 60 chromatin structure 60 exome sequencing 60 Prochlorococcus 60 QTL mapping 60 subcellular 60 CpG islands 60 immunoblotting 60 phenotype 60 previously uncharacterized 60 Western blotting 60 lymphoid cells 60 terrestrial vertebrates 60 mutant alleles 60 RNA splicing 60 cardiac progenitor cells 60 transcriptional activation 60 beta1 integrin 60 chromosomal rearrangements 60 imprinted genes 60 hierarchical clustering 60 Single Nucleotide Polymorphisms SNPs 60 ZNF# 60 hepatocyte 60 DGGE 60 luciferase gene 60 isotypes 60 piggyBac 60 homodimers 60 enolase 60 perilipin 60 hypervariable 60 MMP# 60 alternative splicing 60 zebrafish genome 60 plastid 60 plastids 60 Neandertal DNA 60 chromosome rearrangements 60 Leptospira 60 C. jejuni 60 dAbs 60 odorant receptor 60 genotypes 59 evolutionarily conserved 59 microbial genome 59 Hox gene 59 nucleosome positioning 59 PDZ domains 59 mutagenesis 59 immunofluorescence 59 germline cells 59 Phylogenetic 59 H#K#me# 59 lincRNAs 59 causal variants 59 methyltransferases 59 single nucleotide polymorphism 59 5 hydroxymethylcytosine 59 neurotransmitter receptor 59 CCR3 59 CSHL scientists 59 mutational analysis 59 binding affinities 59 PCR amplification 59 fluorescently labeled 59 proteolytic cleavage 59 gene deletions 59 Notch signaling pathway 59 Microarray analysis 59 molecular markers 59 sRNA 59 posttranslational modifications 59 budding yeast 59 nucleic acid sequence 59 taxa 59 miR# 59 ribosomal RNA 59 MicroRNA 59 gene expression profiling 59 DNA methyltransferases 59 physicochemical properties 59 causative genes 59 A. gambiae 59 phylogenetic 59 transferrin receptor 59 subfamilies 59 distantly related species 59 cnidarians 59 S. pombe 59 gene amplification 59 prokaryote 59 lincRNA 59 allelic 59 ORFs 59 molecular phylogeny 59 piRNAs 59 uPAR 59 cytosine methylation 59 cellular pathways 59 cellular organelles 59 plant Arabidopsis 59 flow cytometric 59 autism susceptibility genes 59 genes encoding 59 microdeletions 59 parasitic nematode 59 shotgun sequencing 59 lysate 59 CRISPR 59 worm Caenorhabditis elegans 59 ribonucleic acids 59 S. cerevisiae 59 Genotypic 59 denaturing gradient gel electrophoresis 59 unicellular organism 59 FFPE tissue samples 59 multipotent stem cells 59 molecular biomarkers 59 protein phosphorylation 59 coevolution 59 insertional mutagenesis 59 Drosophila melanogaster 59 mechanistic insight 59 Pichia pastoris 59 mutant proteins 59 nematode worm 59 transgenic mouse models 59 TAp# 59 telomere DNA 59 nucleases 59 tRNA synthetase 59 gene locus 59 colocalization 59 immunoglobulin genes 59 chick embryo 59 antibody reagents 59 cellular prion protein 59 ligand binding 59 honeybee genome 59 mammalian 59 Amborella 59 phylogenetic analysis 59 sea urchin genome 59 ciliates 59 transcriptional coactivator 59 transgenesis 59 mitochondrial genome sequence 59 recombinants 59 chromatin proteins 59 worm C. elegans 59 PGCs 59 FUS1 59 protein kinases 59 phagocyte 59 serine threonine kinase 59 nucleolin 59 mammalian fatty acid 59 MALAT1 59 exomes 59 Xenopus tropicalis 59 filamentous fungi 59 de novo sequencing 59 striata 59 roundworm C. elegans 59 transgenic mice expressing 59 HepG2 cells 59 Hox genes 59 protein translocation 59 mutant mouse 59 cell nuclei 59 p# INK4a 59 uncharacterized genes 59 HIF 1α 58 Immunohistochemical analysis 58 colorectal tumor 58 amino acid alanine 58 vertebrate embryos 58 HLA molecules 58 thermodynamic stability 58 segmental duplication 58 amino acid sequence 58 tRNA synthetases 58 HEK# cells 58 Volvox 58 endonuclease 58 X. tropicalis 58 mammary epithelial cells 58 allelic variation 58 quantitation 58 FFPE samples 58 homologs 58 beta globin gene 58 epigenetic modifications 58 enzymatic activity 58 DNA microarray 58 GPx 58 FGFR3 58 microRNA profiling 58 Entrez Gene 58 mouse testes 58 Argonaute proteins 58 Htt 58 synthases 58 heterozygotes 58 Neandertal genome 58 ploidy 58 glycoproteins 58 β galactosidase 58 Streptomyces 58 transmembrane 58 genomically 58 KIAA# 58 organogenesis 58 transcriptionally 58 secretory pathway 58 CD# expression [001] 58 haplotypes 58 HERV 58 #S subunit 58 provirus 58 endogenous retroviruses 58 retinal neurons 58 Fc receptor 58 EMBL scientists 58 tropomyosin 58 immunofluorescence microscopy 58 SSR markers 58 monogenic 58 HER2 neu 58 mutant strains 58 cell lysates 58 triplet repeats 58 siRNAs targeting 58 cDNA sequences 58 gene duplications 58 Fig. 3a 58 genetic alterations 58 quantitative PCR qPCR 58 phylogenetic tree 58 mutated K ras 58 E1A 58 Dpp 58 metagenomics 58 transduced 58 ultrastructure 58 epitope 58 insertions deletions 58 Agrobacterium tumefaciens 58 DNA transposons 58 mRNAs 58 DNA rearrangements 58 massively parallel sequencing 58 hypermethylated 58 heterozygosity 58 chromatogram 58 viral genome 58 actin binding 58 HLA DQ 58 metabolomic profiling 58 P. falciparum 58 K RAS 58 OGG1 58 transgenic mouse model 58 protein ligand 58 KLF4 58 metabolite concentrations 58 Arabidopsis plants 58 #BP# 58 targeted resequencing 58 morphologically 58 situ hybridisation 58 Proteobacteria 58 morphogenesis 58 genomewide association studies 58 phenotypically 58 peptide sequences 58 mammary stem cells 58 Hh pathway 58 epigenetic mechanisms 58 cDNA clones 58 undifferentiated hESCs 58 Dicer enzyme 58 microdeletion 58 miRNA assays 58 transposable elements 58 ant genomes 58 TaqMan 58 noncoding DNA 58 centromeric 58 bacterial genome 58 silico prediction 58 PIP3 58 RNA extraction 58 homology modeling 58 pea aphid 58 NF1 gene 58 fig. S1 58 CHO cells 58 mosaicism 58 lactase persistence 58 TXNIP 58 PITX2 58 Nasonia 58 isogenic 58 structural rearrangements 58 isoforms 58 embryoid bodies 58 epithelial tissues 58 FGFR4 58 morphological 58 HLA DQ2 58 DLC1 58 homodimer 58 transmembrane proteins 58 PCR amplified 58 genotyping assays 58 viral isolates 58 trypanosome 58 neurite outgrowth 58 symbiont 58 viral RNA 58 ERK signaling 58 kilobases 58 Solexa sequencing 58 glycosylated 58 subcellular structures 58 neuroanatomical 58 PcG proteins 58 H#K# [002] 58 biomarker identification 58 chordate 58 Plasmodium 58 odorant receptors 58 olfactory receptor 58 heterochromatic 58 synaptic proteins 58 polymerases 58 chloroplast 58 trophoblast cells 58 drug metabolizing enzymes 58 Corynebacterium 58 phosphorylated proteins 58 L. pneumophila 58 C. elegans worm 58 Cre recombinase 58 gene inactivation 58 meganuclease 58 V#F mutation 58 Genome Sequencer FLX System 58 L1 retrotransposons 58 midgut 58 mRNA translation 58 ribosomal genes 58 cytochrome P#s 58 var genes 58 condensin 58 causative mutation 58 microarray 58 2D electrophoresis 58 unmethylated 58 prognostic markers 58 methylation markers 58 M. pneumoniae 58 catalytically active 58 S#A# [002] 58 obligate intracellular 58 constitutively 58 RQ PCR 58 Sequencing Systems 58 retrotransposons 58 luciferase 58 embryonal 58 trophoblast 58 soluble proteins 58 membrane fusion 58 F. graminearum 57 enzymatic pathways 57 cytogenetic 57 differentially expressed proteins 57 phylogeographic 57 miR #a [002] 57 bioassays 57 retrotransposon 57 proteins encoded 57 messenger RNA mRNA 57 shRNAs 57 morphologic 57 Wnt proteins 57 microRNA molecule 57 mouse ESCs 57 chimp genomes 57 chromatin remodeling complex 57 transcriptional regulators 57 At#g# 57 histocompatibility 57 COL#A# 57 glycolytic 57 mammalian sperm 57 messenger RNA mRNA molecules 57 Genetic variation 57 Rap1 57 prion gene 57 Figure 2C 57 CNVs 57 fibril 57 #S ribosomal RNA 57 GFP fluorescence 57 human microbiome 57 fluorescence intensity 57 prokaryotes 57 DNMT1 57 proteolysis 57 protein quantitation 57 polyploids 57 parthenogenetic 57 genotype phenotype 57 protein biosynthesis 57 hemoglobins 57 CTCF 57 selfing 57 lentiviral vectors 57 Array CGH 57 somatic mutation 57 BCL#A 57 histone acetylation 57 zebrafish larvae 57 glycosylation profile 57 hematopoietic progenitors 57 eukaryotic cells 57 phylogenetic relationships 57 mtDNA mutations 57 apoE 57 multinucleated 57 hippocampal neurons 57 intracellular bacteria 57 μ opioid receptor 57 array comparative genomic 57 SiMoA 57 genetic manipulations 57 HLA alleles 57 germline 57 tissue microarray 57 fluorophores 57 HumanHap# BeadChip 57 TEP1 57 heterologous expression 57 Fig. 1A 57 miRNAs miR 57 subnetworks 57 suppressor gene 57 chimpanzee genome 57 NS5B 57 zebrafish embryo 57 centromeres 57 cytokine receptors 57 peroxisome 57 p#/CBP 57 bioluminescence imaging 57 bilaterians 57 short hairpin RNA 57 granulocyte 57 oligonucleotide arrays 57 JAK STAT 57 metalloproteins 57 immunohistochemical analysis 57 Caenorhabditis elegans 57 site directed mutagenesis 57 heterochromatin 57 chromosomal translocations 57 rDNA 57 biomolecular interactions 57 carboxy terminal 57 epigenome 57 positional cloning 57 fluorescent probes 57 promoter methylation 57 Anticalins ® 57 glycosylation 57 ontogenetic 57 mammalian proteins 57 H#K# [001] 57 antigenic epitopes 57 homologous genes 57 HCV replication 57 CGG repeats 57 circulating endothelial cells 57 Gene Ontology GO 57 PKM2 57 ALK mutations 57 MSH2 57 transiently transfected 57 vimentin 57 X ray crystallographic 57 gambiae 57 HbF 57 ligases 57 protein tyrosine phosphatase 57 PCR RFLP 57 ontogeny 57 immunostaining 57 multiplexed assays 57 CD#b 57 Affymetrix GeneChip 57 paternally inherited 57 adipogenic 57 breast epithelial cells 57 haplogroups 57 tRNA genes 57 neuroligins 57 loxP 57 PCR primer 57 mesoderm 57 aneuploidies 57 dbSNP 57 vivo 57 embryonic tissues 57 tetramers 57 HLA genotyping 57 glycomics 57 adenoviral 57 Daphnia genome 57 ubiquitylation 57 CCL#L# 57 podocytes 57 SVZ 57 telomeric 57 D. melanogaster 57 vacuolar 57 beta actin 57 miRBase 57 RNA molecules 57 S. enterica 57 aneuploid 57 riboswitches 57 iPS derived 57 mtDNA sequences 57 isomerase 57 sRNAs 57 β1 57 VNTR 57 genomic aberrations 57 SOCS3 57 FFPE tissue 57 molecular biomarker 57 Ago2 57 planarian 57 microdroplet PCR 57 allele frequencies 57 H2AX 57 Wolbachia infection 57 biosynthetic pathways 57 macromolecule 57 effector protein 57 effector molecules 57 WT1 57 morphogen 57 genetic sequences 57 serpin 57 bacterium Escherichia coli 57 immunohistochemical 57 overexpressing 57 secreted proteins 57 pseudogene 57 LRAT 57 p# MAPK 57 immunoblot 57 microRNAs 57 Mycoplasma genitalium 57 Nedd4 57 PBMCs 57 homologous sequences 57 tRNAs 57 RNA molecule 57 NSCLC tumors 57 proline 57 genetic markers 57 heterologous 57 mtDNA 57 amyloidogenic 57 cytosolic 57 clonal expansion 57 Saccharomyces cerevisiae 57 constitutively active 57 Klf4 57 CpG methylation 57 tumor suppressor protein 57 Transcription factors 57 CHD7 57 affinity purification 57 MLH1 57 mutational 57 hpSC lines 57 RNA sequencing 57 modifier genes 57 druggable target 57 pharmacophore 57 hematopoietic cells 57 Amino acid 57 eukaryotic algae 57 hepatoma 57 branching morphogenesis 57 Skeletal muscle 57 gel electrophoresis 57 quantitate 57 virulence factors 57 Confocal microscopy 57 Genotypes 57 PALB2 57 guanine G 57 NF κB activation 57 epigenomes 57 manually curated 56 transcriptional machinery 56 ADAMTS# 56 #q#.# [002] 56 #p#.# [001] 56 generalized vitiligo 56 proteolytic activity 56 DNA deoxyribonucleic acid 56 biogenesis 56 netrin 1 56 gDNA