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(Click for frequent words.) 67 differential gene expression 66 microarray gene expression 64 #S rRNA 63 fungal genomes 63 monogenic 63 transcriptomic 62 #S rRNA gene 62 miRNA expression 62 cDNA libraries 62 sequence homology 62 genetic loci 62 #S rDNA 62 metabolomic profiles 62 transcriptomes 62 microarray experiments 62 microarray analysis 61 multiple logistic regression 61 soluble proteins 61 S. maltophilia 61 indels 61 homologous genes 61 Arabidopsis genes 61 RNA polymerases 61 missense mutations 61 linkage disequilibrium LD 61 immunoblotting 61 coexpression 61 isotype 61 thermodynamic stability 61 conditional logistic regression 61 transcriptional profiling 61 inferential statistics 61 ribosomal RNA rRNA 61 gene expression datasets 61 multiplex assay 61 breast cancer subtypes 61 ChIP chip 61 qRT PCR 60 fruitfly Drosophila 60 proteomes 60 Western blotting 60 KIAA# 60 cyclic AMP cAMP 60 susceptibility loci 60 differentially expressed genes 60 cytotoxicity assays 60 Arabidopsis genome 60 somatic mutations 60 Gene Ontology 60 proteomics bioinformatics 60 posttranslational modifications 60 transgenic mice expressing 60 subcellular compartments 60 virulence genes 60 nucleotide substitutions 60 sequenced genomes 60 Fas ligand 60 mitochondrial gene 60 transgenic mouse models 60 SLITRK1 60 paralogs 60 enolase 60 TMPRSS2 ERG fusion 60 Microarray analysis 60 RNA sequences 60 transcriptomics 59 metabolomic 59 intergenic regions 59 alternatively spliced 59 genomewide 59 cis regulatory 59 non coding RNA 59 interactome 59 synthetic peptides 59 biochemical assays 59 ChIP seq 59 c Myb 59 M. anisopliae 59 metabolomic profiling 59 transgene expression 59 microsatellite markers 59 druggable targets 59 antibody antigen 59 proteomic analyzes 59 Single Nucleotide Polymorphisms SNPs 59 TLE3 59 chloroplast genome 59 clinicopathological 59 conserved sequences 59 β galactosidase 59 RT qPCR 59 RNA seq 59 gene expression microarrays 59 FUS1 59 phylogenetic trees 59 hexose 59 histone modifications 59 metabonomics 59 Aspergillus nidulans 59 epigenetically 59 RQ PCR 58 nematode C. elegans 58 chromatin immunoprecipitation ChIP 58 genomic variation 58 Lactic acid bacteria 58 Xenopus embryos 58 methylation patterns 58 cytosine methylation 58 mitochondrial DNA mtDNA 58 biologic pathways 58 bisulfite sequencing 58 MTT assay 58 Skeletal muscle 58 polyploid 58 enzymatic pathways 58 oligonucleotide microarrays 58 Proteobacteria 58 toxicogenomic 58 microRNA expression 58 plastid 58 massively parallel sequencing 58 transcriptome sequencing 58 pairwise 58 quantitative RT PCR 58 S. pombe 58 cDNA microarray 58 maize genome 58 mammalian fatty acid 58 cisplatin resistant 58 Confocal microscopy 58 histologic subtypes 58 fig. S4 58 histone methylation 58 Nucleic acids 58 metabolite concentrations 58 Alternative splicing 58 parthenolide 58 #T# L1 58 mRNA transcripts 58 PI3K AKT 58 splice variants 58 transcriptome profiling 58 SNP rs# [001] 58 NOD mouse 58 Phylogenetic analyzes 58 de novo mutations 58 yeast genome 58 thermophilum 58 previously uncharacterized 58 bacterial genomes 58 GnRH neurons 58 macromolecule 58 subcellular localization 58 primate genomes 58 rRNA 58 multigenic 58 phylogeographic 58 ab initio calculations 58 mutational analysis 58 phylogenetic analyzes 58 postnatal foreskin fibroblasts 58 recombination hotspots 58 TCF#L# gene 58 haplotype map 58 microRNA profiling 58 morphogen 58 RRM1 58 Transcriptome 58 multiple linear regression 58 glycosylated 58 noncoding RNAs 58 TMPRSS2 ERG 58 A. thaliana 58 putative biomarkers 58 genotype phenotype 58 lymphoblastoid cell lines 58 monomeric 57 electrophysiological properties 57 orthologs 57 p#/CBP 57 constitutively expressed 57 supertree 57 QTLs 57 histone H4 57 microbiomes 57 Poisson regression 57 combinatorial libraries 57 comparative genomic 57 GPI anchored 57 JAK STAT 57 distinct subtypes 57 phenotypic traits 57 HER2 expression 57 assay detects 57 chromosome #q# [002] 57 intergenic 57 secreted protein 57 biomolecular interactions 57 microRNA biomarkers 57 multivariate analyzes 57 synteny 57 Bayesian inference 57 immunohistochemical 57 serous ovarian cancer 57 nucleotide sequence 57 5 hydroxymethylcytosine 57 oligonucleotide microarray 57 quantitative trait loci 57 silico prediction 57 quasispecies 57 Multivariate logistic regression 57 hemagglutinin gene 57 Genotypic 57 logistic regression analysis 57 gene expression patterns 57 genomic loci 57 automated microscopy 57 sputum specimens 57 mRNA expression 57 mammalian organisms 57 PKC isoforms 57 pharmacodynamic markers 57 peptidic 57 immunofluorescence microscopy 57 short hairpin RNAs 57 homochirality 57 transcriptional activation 57 multivariate regression analysis 57 mRNA molecules 57 untranslated regions 57 RAS RAF MEK 57 RANTES 57 perilipin 57 genes differentially expressed 57 CYT# potent vascular disrupting 57 linear regressions 57 physico chemical 57 N glycan 57 arabidopsis 57 trans splicing 57 metagenomic 57 budding yeast 57 Cathepsin B 57 C#T [002] 57 mutated K ras 57 lymphoid tumors 57 microRNA molecules 57 phylogenetically 57 enterotypes 57 hypermethylated 57 DNA demethylation 57 Pichia pastoris 57 clinicopathologic 57 colorectal tumor 57 LRP5 57 ERK signaling 57 genomic sequences 57 transmembrane proteins 57 obligate intracellular 57 experimentally validated 57 odorant receptor 57 genetic aberrations 57 genomewide association study 57 CYP#D# gene 57 HepG2 cells 57 Paleobiology Database 57 SIRT2 57 epithelial tumors 57 insertional mutagenesis 57 transfection efficiency 57 RefSeq 57 microtissues 57 xenobiotic 57 ncRNA 57 comparative genomic analysis 57 multiprotein complex 57 Raman spectra 57 promoter methylation 57 genome rearrangements 57 preferentially bind 57 kidney urologic 57 ribosomal DNA 57 siRNA knockdown 57 siRNAs targeting 57 DNA methyltransferases 57 #beta HSD 1 57 cDNAs 57 molecular phylogenetic 57 hierarchical clustering 57 ABL1 57 cypin 57 mRNA sequences 57 bioinformatic analysis 57 clonal expansion 57 TCF#L# 57 autosomal 57 trimers 57 cellulases 57 stilbene 57 EGF receptors 57 tRNA synthetase 57 electrocorticography 56 filamentous fungi 56 quantitative PCR qPCR 56 antiproliferative effects 56 quantitate 56 chromatogram 56 epigenomic 56 FGFs 56 endophenotypes 56 alpha7 NNR 56 operons 56 immunohistochemical analysis 56 meganuclease 56 HOTAIR 56 multigene 56 S. cerevisiae 56 ARF1 56 Mathematical modeling 56 metazoans 56 single celled yeast 56 Rap1 56 morphological traits 56 Flow cytometry 56 DHPLC 56 COL#A# 56 aT cell 56 histone modification 56 FGFR3 56 tissue microarray 56 subnetworks 56 C. neoformans 56 Illumina sequencing 56 gene loci 56 intracellular signal transduction 56 serine threonine kinase 56 hypericin 56 multiplexed assays 56 endospores 56 pleiotropy 56 previously undescribed 56 mycobacterial 56 phenotypic variation 56 intronic 56 outer membrane proteins 56 genomic proteomic 56 miRNA sequences 56 MC4R gene 56 acetylated 56 coding sequences 56 gene expression microarray 56 nucleic acid sequence 56 nucleosome positioning 56 organism genome 56 ribosomal RNA 56 tumor histology 56 APTIMA HPV 56 VeraCode 56 Array CGH 56 E. faecalis 56 chimp genomes 56 ORMDL3 56 uncharacterized genes 56 enzymatic reactions 56 segmental duplication 56 orthologous genes 56 fission yeast 56 p# biomarker 56 Genetic variations 56 Drosophila genome 56 homodimers 56 genomewide association studies 56 prospective multicentre 56 gene amplification 56 survivin expression 56 chromosome #p# [002] 56 nanoprobe 56 Locked Nucleic Acid LNA 56 paternally inherited 56 proteomic analysis 56 IgG4 56 proline 56 tumorigenicity 56 hypervariable 56 PECARN 56 monozygotic twins 56 electrophysiologic 56 bioassays 56 gene expression profiles 56 2D gel electrophoresis 56 isotypes 56 agarose gel electrophoresis 56 physicochemical properties 56 Dehalococcoides 56 metabolome 56 dimeric 56 GBM tumors 56 ELISPOT assay 56 prokaryotic 56 coding genes 56 intracellular signaling 56 cytochrome b 56 colorectal adenocarcinoma 56 N Myc 56 genotypic 56 quantitative PCR 56 inbred strains 56 clinico pathological 56 hybridizations 56 DGGE 56 SNP rs# [002] 56 Purkinje cell 56 immunostaining 56 pulp metallic 56 evolutionary conserved 56 Lp PLA 2 56 directed mutagenesis 56 KCNQ1 56 Sanger sequencing 56 biological macromolecules 56 Htt 56 probabilistically 56 evolvability 56 potent inducer 56 gene rearrangements 56 KineMarker TM 56 transgenic rats 56 genomic alterations 56 ChIP Seq 56 beta1 integrin 56 fusion enhancers 56 fluorimetry 56 KRAS oncogene 56 thymidylate synthase TS 56 Rab5 56 DNA methylation patterns 56 MAPK pathway 56 protein coding RNAs 56 prion strains 56 GLUT1 56 nucleotide sequences 56 complexation 56 phenotypic expression 56 pharmacophore 56 neural tissues 56 exome 56 lymphoid cells 56 #S subunit 56 P. patens 56 genome annotation 55 mean ± SEM 55 neuronal signaling 55 MALDI TOF MS 55 recombinant spider silk 55 VHL gene 55 sphingolipid 55 prokaryote 55 genotyping arrays 55 carboxyl terminal 55 miRNA molecules 55 tumor biopsies 55 synthases 55 serine threonine 55 multivariable Cox 55 RFLP 55 ribozyme 55 serum antibodies 55 transcriptome analysis 55 BDNF protein 55 FGF signaling 55 laser desorption 55 enzymatic pathway 55 Yamanaka recipe 55 cathepsins 55 ALK mutations 55 Immunohistochemical analysis 55 trait locus 55 enzymatically active 55 cellular prion protein 55 Pearson correlation coefficients 55 prognostically 55 binding affinities 55 sirtuin activators 55 GNAQ 55 SELDI TOF MS 55 phenotyping 55 MRSA isolates 55 molecular subtypes 55 Jhdm2a 55 #q# deletion 55 pancreatic ductal 55 branching morphogenesis 55 PcG proteins 55 cell lysate 55 HepaMate 55 Kaplan Meier curve 55 immunofluorescent 55 aCGH 55 uncharacterized 55 bronchial epithelial cells 55 endogenous ligands 55 amino acid substitutions 55 glial tumors 55 fully sequenced genomes 55 apoE 55 noncoding 55 chromatin structure 55 IGFBP2 55 neurexins 55 unmutated 55 CD# expression [001] 55 miRview ™ squamous 55 microRNAs miRNAs 55 stepwise logistic regression 55 viral nucleic acids 55 ANCOVA 55 bacterial virulence 55 amino acid sequences 55 SETDB1 55 PCR primers 55 methylation markers 55 cynomolgus macaques 55 noncoding DNA 55 chromosome aberrations 55 Sanger Sequencing 55 Pseudomonas syringae 55 PALB2 55 tumor suppressors cytokines 55 trophoblast cells 55 ependymomas 55 plant Arabidopsis 55 nucleotide variations 55 genes CYP#C# 55 mammalian genomes 55 pancreatic adenocarcinoma 55 protein conformation 55 tNOX 55 System IPSS 55 PTPN# 55 ABCB1 55 moss Physcomitrella patens 55 protein tyrosine phosphatases 55 eukaryotic cell 55 potent suppressor 55 antiapoptotic 55 enzyme AMPK 55 mass spectrometric 55 CHI#L# 55 metaanalysis 55 morphometrics 55 uracil 55 multiplex PCR 55 VNTR 55 clade B 55 Meta analyzes 55 ERBB2 55 LPA gene 55 5 hmC 55 plasma pharmacokinetics 55 seminomas 55 hepatoma 55 gene deletions 55 kinome 55 paraffin embedded tissue 55 alpha synuclein protein 55 ligand receptor 55 orthologous 55 TIMP 1 55 urease 55 Mass spectrometry 55 transcriptionally active 55 Phylogenetic analysis 55 microRNA molecule 55 eukaryotic algae 55 capillary electrophoresis CE 55 Multiple logistic regression 55 Epigenomics proprietary 55 gene locus 55 FGFR4 55 androgen receptor gene 55 Sequencing Systems 55 phenotypic characteristics 55 prodynorphin 55 BCL#A 55 biotransformation 55 unicellular organism 55 histological subtype 55 lysate 55 coding exons 55 5 HT2A serotonin 55 protein translocation 55 synthetic lethality 55 differentially regulated 55 amyloid plaque formation 55 EMBL scientists 55 APOE genotype 55 SAXS 55 anterior pituitary 55 Mutational 55 Dictyostelium 55 homology modeling 55 chromatin immunoprecipitation 55 Alu elements 55 hormone receptor status 55 uPAR 55 C# fullerenes 55 glycosylated proteins 55 PI3K Akt 55 murine models 55 H#K#me# 55 CYP #D# 55 secretory pathway 55 TPMT 55 HIV tropism 55 morphometric 55 RNA ribonucleic acid 55 denaturing gradient gel electrophoresis 55 tiny roundworm 55 RNA Seq 55 mitogen activated protein kinases 55 transfected cells 55 MSH2 55 cytokine signaling 55 HIF 1α 55 human leukocyte antigens 55 forkhead 55 NMR LipoProfile test 55 BACcel ™ 55 bivariate 55 epigenetic modifications 55 HCCs 55 BiTE 55 CardioPET 55 Protein Kinase C 55 carcinoembryonic antigen 55 surface plasmon resonance 55 PNA FISH TM 55 MWNTs 55 DNase 55 cleavable linker 55 phenotypic differences 55 intracellular bacteria 55 epigenomics 55 RNA splicing 55 chromosomal DNA 55 oncogenic mutations 55 AtherOx 55 ENPP1 55 redox active 55 posttranslational modification 55 fluorescent probes 55 histone acetyltransferase 55 xenograft models 55 Transcription factors 55 β1 55 intercellular signaling 55 dihydrofolate reductase 55 N. gonorrhoeae 55 BAC clones 55 phytochrome 55 squamous cell lung cancer 55 biophysical techniques 55 sRNA 55 transcriptional machinery 55 hematological parameters 55 alpha helices 55 baker yeast Saccharomyces cerevisiae 55 hippocampal neurons 55 HSF1 55 hematopoietic cancers 55 FSH receptor 55 protein isoforms 55 histone deacetylase HDAC 55 fluorescently labeled 55 Fig. 3a 55 antimicrobial susceptibility 55 glycolytic 55 XL# inhibits 55 lung adenocarcinomas 55 molecular abnormalities 55 explanatory variables 55 mammalian tissues 55 heritable traits 55 interferon γ 55 genomic variants 55 Cardiotoxicity 55 fluoroquinolone resistance 55 multiparametric 54 CSF biomarkers 54 microwell plate 54 cystatin 54 tumor suppressor PTEN 54 ESBL producing 54 GABAergic interneurons 54 amino acid residues 54 TP# gene 54 functional polymorphism 54 HuCNS SC ® 54 ERalpha 54 Stat1 54 linear regression analyzes 54 p# Shc 54 HEK# cells 54 transcriptional regulator 54 gDNA 54 dbGaP 54 CagA 54 immunofluorescence 54 surface plasmon resonance SPR 54 Amino acid 54 neuroligins 54 neurite outgrowth 54 MTHFR gene 54 TXNIP 54 kinase domain 54 RNA binding 54 monophyletic 54 NSCLC tumors 54 antisense inhibitors 54 causal variants 54 microRNA genes 54 transcriptional repressor 54 epigenetic modification 54 molecular biomarkers 54 site directed mutagenesis 54 mammalian circadian clock 54 proteins encoded 54 beta. 54 multivariate logistic regression 54 transferrin receptor 54 anticancer therapeutics 54 lincRNA 54 ERK1 2 54 splice junctions 54 etiologic 54 body louse genome 54 Stat5 54 Mechanistic studies 54 radiolabeled antibodies 54 oncogenic transformation 54 chemometrics 54 superposed 54 nanoelectronics photonics 54 glycopeptides 54 protein ligand interactions 54 BACcel 54 HLA DRB1 54 infectious prion proteins 54 mucinous 54 EGIR 54 electroencephalographic 54 microcephalin 54 insoluble proteins 54 binary logistic regression 54 intracellular proteins 54 carbonate globules 54 deCODE AF TM 54 PORxin TM 54 ADME properties 54 lysing 54 glycosyltransferase 54 Modified Citrus Pectin 54 luciferase reporter 54 Entrez Gene 54 bilayers 54 genomically 54 Smac mimetic 54 chick embryo 54 NKX#.# 54 mTOR signaling 54 HOXB# 54 soluble TNF receptor 54 immunoblot 54 Anticalins R 54 BCR ABL mutations 54 Leydig cell 54 ligand binding 54 homologies 54 Fig. 2A 54 transcriptome 54 Phenotypic 54 JNK1 54 histologies 54 mutant proteins 54 IL #p# 54 dose proportionality 54 microbial genomes 54 indel 54 FDG PET imaging 54 PARP inhibition 54 catalytic antibodies 54 phylogenies 54 ABCB1 gene 54 Membrane proteins 54 epitope mapping 54 nematode worms 54 BioMAP ® Systems 54 Olig2 54 viral tropism 54 multivariate regression 54 mTOR signaling pathway 54 ultracold molecules 54 CYP#A# gene 54 physiologically relevant 54 xCELLigence System 54 TBC#D# 54 4E BP1 54 cyto 54 Wnt signaling pathway 54 meta regression 54 HTRF R 54 absorption spectra 54 morphogens 54 liquid chromatography tandem 54 GFP fluorescence 54 phylogenetics 54 engineered RAP peptides 54 splice variant 54 2D electrophoresis 54 proteins nucleic acids 54 antisense inhibition 54 hexamer 54 chromosome #p#.# 54 eTag assays 54 microRNA assays 54 GSTP1 54 antisense RNA 54 TRAIL induced apoptosis 54 CALGB 54 genomic sequence 54 cross sectionally 54 TILLING 54 druggable target 54 trimeric 54 introgression 54 chick embryos 54 coactivators 54 oncoproteins 54 lentiviral 54 cellulase enzymes 54 kinase profiling 54 metabolizing enzymes 54 heterogeneous catalysts 54 Xenopus laevis 54 lysates 54 Mycoplasma genitalium 54 Dicer enzyme 54 tumor hypoxia 54 aequorin 54 protein microarrays 54 Myeloperoxidase 54 malaria parasite genome 54 TGF alpha 54 miRNA profiling 54 quinone 54 quantitative proteomics 54 MLL2 54 JILA scientists 54 glutamate transporter 54 x ray crystallographic 54 bioinformatic tools 54 reverse vaccinology 54 phosphorylated proteins 54 miRNAs miR 54 VEGFR1 54 Phylogenetic 54 viral genomes 54 redox reactions 54 vanA gene 54 vibrational spectroscopy 54 Entamoeba 54 p# MAPK 54 rs# [004] 54 MT1 MMP 54 PrPSc 54 tau protein tangles 54 ant genomes 54 transcranial Doppler ultrasound 54 K ras gene 54 prostate carcinoma 54 calcium homeostasis 54 extracellular proteins 54 PROTEGE trial 54 cell nuclei 54 biocatalytic processes 54 #S rRNA genes 54 globular proteins 54 prokaryotes 54 Luminex xMAP technology 54 proteomic technologies 54 3D QSAR 54 telomere lengths 54 multivariate statistical 54 guanosine 54 HMG CoA reductase 54 cellular organelles 54 EBNA1 54 tRNA synthetases 54 Replikins 54 reverse transcriptase RT 54 Mass Spectrometry MS 54 multivariable logistic regression 54 zebrafish larvae 54 FISH fluorescence 54 NR2B subunit 54 protein phosphorylation 54 protonated 54 gene inactivation 54 chiral molecule 54 somatic mutation 54 Anticalins ® 54 clonally 54 protein glycosylation 54 green alga Chlamydomonas 54 promoter hypermethylation 54 VKORC1 54 chromosome #p# [001] 54 oligonucleotide probes 54 catechol O methyltransferase 54 HIF 1alpha 54 neuroanatomical 54 MALAT1 54 metastatic lymph nodes 54 L1 retrotransposons 54 eukaryotic genomes 54 iPS derived 54 PI3K/mTOR 54 MMP# 54 autotrophic 54 sarcosine 54 carboxy terminal 54 genomics transcriptomics 54 recursive partitioning 54 colonic mucosa 54 Immunohistochemical staining 54 rotaxanes 54 Butyrate 54 NS5B 54 transcriptionally 54 nano fluidic 54 physicochemical 54 heterochromatic 54 evolutionary computation 54 Photosystem 54 CD# expression [002] 54 macaque genome 54 viral genome 54 Rho GTPases 54 bioluminescence imaging 54 phospholipase 54 morphometric analysis 54 Drp1 54 WT1 54 procaspase 3 54 stoichiometry 54 catalytically active 54 EphA2 54 IDH1 mutation 54 extramedullary 54 enzyme catalysis 54 situ hybridisation 54 multivariable analysis 54 vitamin D receptors 54 HLA molecules 54 lysine residues 54 phosphorylated tau 54 spore formation 54 eco toxicological 54 Corynebacterium 54 FDG PET scans 54 positional cloning 54 NADiA 54 DQB1 * 54 childhood leukemias 54 CDKN2A 54 roundworm C. elegans 54 colorectal adenoma 54 Tasigna prolongs 54 peptide antigens 54 triterpenoids 54 manually curated 54 Genome sequencing 54 Pol IV 54 tissue microarrays 54 neural progenitor cells 54 EEG recordings 54 progranulin gene 54 nanoparticle aggregates 54 OGAP R 54 hematological relapse 54 cell signaling pathways 54 gastric cardia 54 chromosome #q# [001] 54 pro angiogenic 54 HepDirect prodrug 54 C. elegans worm 54 MiRNAs 54 physico chemical properties 54 prokaryotic cells