Related by context. All words. (Click for frequent words.) 82 genotype 74 alleles 69 polymorphisms 69 allele 69 phenotype 68 genotypic 68 heterozygous 68 phenotypes 67 loci 67 A. thaliana 66 mutations 66 homozygous 66 heterozygotes 66 SNPs 65 haplotype 65 homozygotes 65 polymorphism 64 QTLs 64 haplotypes 64 genetic variants 64 orthologs 64 subtypes 63 missense mutations 63 genotyped 63 susceptibility genes 63 transfected 63 homozygote 63 EGFR mutations 63 heterozygote 62 mRNA expression 62 IGFBP 62 diploid 62 isoforms 62 genes 62 clonal 62 linkage disequilibrium 62 rs# [001] 62 IL#B 62 microsatellite markers 62 mutation 62 subtype 61 quantitative trait loci 61 Genotypes 61 DRD2 61 clades 61 gene variants 61 chromosomal regions 61 GSTM1 61 allele frequencies 61 gene expression profiles 61 homozygosity 61 HPV# 61 haplogroups 61 transgene expression 61 NNRTI resistance 61 genomes 61 genetic polymorphisms 61 genetic variation 60 genes encoding 60 serum concentrations 60 miRNAs 60 subpopulations 60 gambiae 60 FLT3 60 mutant allele 60 phenotypic variation 60 heritable traits 60 rs# [004] 60 MHC genes 60 GSTT1 60 rs# [002] 60 virulence genes 60 germline mutations 60 C#Y 60 genetic variations 60 genetic markers 60 transcriptomes 59 #S rRNA 59 epitope 59 K#R [002] 59 HBV genotype 59 gene 59 neutralizing antibody 59 C. albicans 59 biotypes 59 clonally 59 penetrance 59 gene expression 59 homologs 59 MRSA isolates 59 karyotypes 59 HCV genotype 59 genetic variability 59 phenotypic 59 clusterin 59 paralogs 59 cDNA libraries 59 CagA 59 miRNA expression 59 bacterial strains 59 bacterial genomes 59 IFN gamma 59 PTPN# 59 phenotypic traits 59 rs# [003] 59 transgene 59 MTHFR 58 gene expression patterns 58 genome 58 methylation patterns 58 CC genotype 58 sporadic ALS 58 seroprevalence 58 #S rRNA gene 58 P. patens 58 transcriptome 58 cDNAs 58 transgenes 58 RNA sequences 58 splice variants 58 allelic variation 58 coinfection 58 CpG 58 GSTP1 58 phenotypically 58 inbred strains 58 differentially expressed genes 58 ERBB2 58 MLH1 58 coding sequences 58 sequenced genomes 58 TT genotype 58 mRNA transcripts 58 gene mutations 58 breast carcinomas 58 chromosome #q# [001] 58 selfing 58 #q# [001] 58 Arabidopsis 58 recombinants 58 Genotype 58 seronegative 58 allelic 58 PCa 58 kaempferol 58 K#N 58 proteomes 57 mutant alleles 57 distinct lineages 57 intron 57 G allele 57 allelic variants 57 prostate cancer CaP 57 haplogroup 57 S. enterica 57 indels 57 TIMP 57 KRAS mutations 57 mycobacteria 57 HCV genotypes 57 immunoglobulin genes 57 CNVs 57 KRAS gene 57 outcrossing 57 ABCB1 57 C#BL 6 mice 57 differential gene expression 57 gene sequences 57 HLA DRB1 * 57 molecular markers 57 Bacteroides 57 receptor gene 57 missense mutation 57 Typhi 57 neoplastic 57 prion strains 57 C. neoformans 57 biotype 57 cDNA 57 genetic variant 57 Genetic variation 57 autosomal 57 deleterious mutations 57 VKORC1 57 KLF4 57 mitochondrial gene 57 HLA DQ2 57 5 HTTLPR 57 histone modification 57 PFGE 57 C#BL/#J 57 viral isolates 57 uPAR 57 Haplotype 57 substrate specificity 57 pathogenic mutations 57 variant allele 57 amplicons 57 Supplementary Table 57 B. subtilis 57 exomes 57 #S rDNA 57 microbiota 56 landraces 56 P. falciparum 56 WT1 56 bacterial symbiont 56 genetic loci 56 nanomolar 56 C#BL 6 56 autoantibody 56 epistasis 56 viral strains 56 HCV replicon 56 taxa 56 mutant strains 56 S. cerevisiae 56 nucleotide substitutions 56 mtDNA 56 MEFs 56 K ras 56 serogroup 56 #S rRNA genes 56 functional polymorphism 56 microarray experiments 56 genetic variants associated 56 variant alleles 56 CYP#D# gene 56 synuclein 56 mosaicism 56 EBV infection 56 Phylogenetic analysis 56 clade 56 transcriptional profiling 56 cyclin E 56 SLC#A# [002] 56 intergenic 56 mitochondrial genomes 56 HBeAg positive 56 Clusterin 56 rRNA 56 exon 56 introgression 56 ortholog 56 NRTI resistance 56 HepG2 cells 56 single nucleotide polymorphism 56 gene polymorphisms 56 VNTR 56 pathogen 56 OPRM1 gene 56 PTEN mutations 56 APOE e4 56 genetic sequences 56 breast carcinoma 56 Leydig cell 56 colorectal tumors 56 HTLV 56 HbF 56 ploidy 56 genomic 56 MYH9 gene 56 K ras mutations 56 LNCaP cells 56 RASSF1A 56 nucleotide sequence 56 M. bovis 56 IgA deficiency 56 viremia 56 MnSOD 56 C. jejuni 56 Supplementary Fig 56 PON1 56 T2DM 56 UGT#A# * 56 cDNA microarray 56 μmol L 56 isoenzymes 56 colorectal neoplasia 56 heterologous expression 56 protein tyrosine phosphatase 56 serotype 56 MC1R gene 56 gene polymorphism 56 ApoE 56 H#K#me# 56 TACI mutations 56 indel 56 Anopheles gambiae 56 sequence homology 56 phenotypic characteristics 55 genomewide 55 heterodimers 55 parasitaemia 55 clade B 55 methylated DNA 55 CGG repeats 55 unmethylated 55 activin 55 V#F mutation 55 Enterobacteriaceae 55 LPA gene 55 gene loci 55 P. gingivalis 55 outer membrane proteins 55 C. trachomatis 55 EGFR mutation 55 antibody responses 55 genetic polymorphism 55 microdeletions 55 serum samples 55 lactis 55 hydroxyvitamin D levels 55 serotypes 55 constitutively 55 histone modifications 55 cagA 55 SNP rs# [001] 55 CDKN2A 55 miR #a [001] 55 IDH2 55 gene locus 55 null mice 55 HNSCC 55 APOE4 55 MGUS 55 alternatively spliced 55 Genotypic 55 S. maltophilia 55 tumor subtypes 55 μg ml 55 causal variants 55 susceptibility loci 55 plastids 55 pseudogenes 55 karyotype 55 HLA DRB1 55 YKL 55 HLA molecules 55 gene variant 55 HLA genes 55 COL#A# 55 mitochondrial genome 55 Serotype 55 GABRA2 55 aneuploid 55 unmutated 55 E. faecalis 55 lymphoblastoid cell lines 55 differentially expressed 55 homodimers 55 nucleotide substitution 55 HLA alleles 55 transcriptional 55 adiponectin concentrations 55 Drosophila genome 55 vivax 55 herpesviruses 55 Plasmodium falciparum 55 HCV infected 55 cystatin 55 antigen 55 genetic alterations 55 promoter methylation 55 Leptospira 55 fig. S1 55 genotypic resistance 55 autism susceptibility genes 55 overexpressing 55 downregulated 55 monozygotic twins 55 IgM 55 Mus musculus 55 proband 55 fluoroquinolone resistant 55 subfamily 55 capsular polysaccharide 55 Polymorphisms 55 MAPK pathway 55 nondiabetic 55 FMR1 gene 55 allele frequency 55 antibody titers 55 LRAT 55 mutated K ras 55 glycoproteins 55 chromosome #q# [002] 55 #p# [003] 55 lineages 55 CLL cells 55 operon 55 EphB4 55 CYP#B# 55 heterozygosity 55 HLA B# 55 PALB2 55 seropositivity 55 CCR5 delta# 55 cDNA library 55 CFH gene 55 immunostaining 55 JAK2 V#F 55 gastric adenocarcinoma 55 DNA sequences 55 multivariate analyzes 54 ALDH2 54 Arabidopsis thaliana 54 tocopherol 54 telomere lengths 54 miRNA genes 54 transcriptomic 54 NPM1 mutations 54 peripheral blood mononuclear 54 CCL#L# 54 distinct subtypes 54 Candida species 54 chloroplast genome 54 glycosylation 54 orthologous genes 54 brucei 54 somatic mutations 54 polyploid 54 qRT PCR 54 androgen receptor AR 54 CISH 54 Haplogroup 54 subclinical 54 colorectal tumor 54 tyrosine phosphorylation 54 receptor binding 54 Alu elements 54 K ras gene 54 paternally inherited 54 genes CYP#C# 54 HBeAg negative 54 kDa protein 54 variant rs# 54 albicans 54 BRAF mutation 54 multigene 54 GPx 54 prion protein gene 54 amino acid substitutions 54 hypermethylation 54 amino acid residues 54 glycoprotein 54 defensin 54 CDK4 54 Arabidopsis genome 54 methylenetetrahydrofolate reductase 54 coding exons 54 enzymatic activity 54 mRNA molecules 54 Apolipoprotein 54 mRNA 54 M. genitalium 54 transfected cells 54 mtDNA mutations 54 mRNAs 54 conserved sequences 54 microsatellite loci 54 Plasmodium 54 major histocompatibility complex 54 rDNA 54 GBM tumors 54 haploid 54 BRCA1 mutations 54 phospholipase 54 SE alleles 54 lactobacilli 54 TCF#L# 54 NNRTI resistant virus 54 orthologous 54 plant Arabidopsis 54 probands 54 perilipin 54 essential thrombocythemia 54 #q#.# [002] 54 ALK mutations 54 apolipoproteins 54 APOE genotype 54 APOE gene 54 Yersinia enterocolitica 54 microRNA expression 54 epitopes 54 pneumoniae 54 IgG antibody 54 constitutively expressed 54 mutant BRAF 54 ESTs 54 genomic sequences 54 isogenic 54 2n = 54 chromosome #q 54 BRAF mutations 54 Bt toxins 54 D. melanogaster 54 isoprostane 54 estrogen receptor ER 54 prevalences 54 H pylori 54 MYH9 54 Supplemental Figure 54 PBMCs 54 fungal genomes 54 HLA DR 54 isoform 54 eukaryotic 54 MetS 54 apolipoprotein 54 HFE gene 54 luciferase reporter 54 N acetyltransferase 54 autoantibodies 54 genes predisposing 54 chromosomal rearrangement 54 FMR1 54 intronic 54 quantitative RT PCR 54 HLA DRB1 SE 54 ribosomal proteins 54 CD8 + 54 Drosophila melanogaster 54 subcellular localization 54 genetic mutations 54 At#g# 54 MSH2 54 dopamine transporter gene 54 lymphocytic 54 imprinted genes 54 transcriptional repressor 54 mitochondrial DNA mtDNA 54 ERCC1 54 granulocyte 54 obstructive coronary artery 54 Rap1 54 APOE allele 54 hepatoma 54 α KG 54 T#I [002] 54 lymphoid cells 54 UGT#A# 54 genomic loci 54 Mycobacterium tuberculosis 54 CDH1 54 nonpathogenic 54 pDCs 54 HBeAg negative chronic hepatitis 54 H. influenzae 54 CIN2 + 54 L. pneumophila 54 ncRNAs 54 QTL mapping 54 WSN/# 54 Borrelia 54 distant metastasis 54 EGFRvIII 54 overexpression 54 aggrecan 54 MTHFR gene 53 prognostic marker 53 glabrata 53 drug metabolizing enzymes 53 cytokine 53 Wolbachia 53 transgenic mice expressing 53 MHC molecules 53 genotype 1a 53 TMPRSS2 ERG 53 IFN alpha 53 ZNF# 53 Arabidopsis plants 53 Rickettsia 53 M#V mutation 53 array CGH 53 cytochrome b 53 prognostic factor 53 phylogenetic analyzes 53 interferon γ 53 serologic 53 syngeneic 53 APOL1 53 T. brucei 53 colorectal carcinoma 53 gene rearrangements 53 hepatocellular carcinomas 53 Arabidopsis genes 53 susceptibility gene 53 ADRB2 53 #q# [002] 53 suppressor gene 53 circulating IGF 53 univariate analysis 53 sCJD 53 genomic alterations 53 mycobacterium 53 CYP#D# genotype 53 claudin 53 wildtype 53 tumor antigen 53 TMEM#B 53 ORFs 53 iNOS 53 methylation 53 serum PTH 53 metazoan 53 Wwox 53 SNP rs# [002] 53 mutational 53 HLA B 53 cytoplasmic 53 IgG4 53 S. aureus 53 backcross 53 Phytophthora species 53 binding affinity 53 short hairpin RNA 53 APOE ε4 53 UTRs 53 polygenic 53 gametocytes 53 IgE antibody 53 tetraploid 53 deletion mutant 53 midgut 53 epithelial tumors 53 elevated CRP 53 cytopathic 53 APOC3 53 hydroxylase 53 FasL 53 H. armigera 53 resistant isolates 53 fumonisins 53 HER2 expression 53 fluoroquinolone resistance 53 genomic sequence 53 PITX2 53 biochemical marker 53 haptoglobin 53 etiologic agent 53 spontaneous mutations 53 M. pneumoniae 53 breast cancer subtypes 53 IgG antibodies 53 genotyping 53 basal cell nevus syndrome 53 thymocytes 53 Wolbachia infection 53 P. infestans 53 apolipoprotein E gene 53 miRNA sequences 53 transcriptome analysis 53 hTERT 53 molecular subtypes 53 histological subtype 53 quasispecies 53 CEACAM1 53 elevated triglyceride levels 53 RRM1 53 pancreatic adenocarcinoma 53 oryzae 53 beta lactamases 53 trans retinoic acid 53 Bos taurus 53 globin genes 53 Trichinella 53 S/GSK# 53 transgenic rats 53 BALB c mice 53 serogroups 53 antigenic 53 acetylation 53 replicon 53 epidermidis 53 IGFBP 3 53 isotypes 53 monophyletic 53 HIV uninfected 53 alpha2 53 GlcNAc 53 immune responses 53 N. gonorrhoeae 53 causative mutation 53 constitutively active 53 mutated gene 53 hereditary hemochromatosis 53 chromosome #p# [001] 53 MTT assay 53 fluconazole resistant 53 BRAF protein 53 chromosomal alterations 53 Immunohistochemical analysis 53 transcriptional regulation 53 FGFR2 53 DRB1 * 53 tropism 53 amino acid sequence 53 PIK3CA 53 microsatellite instability 53 gonadotropins 53 carcinoembryonic antigen 53 coinfected 53 HbF levels 53 Plasmodium vivax 53 interferon IFN 53 proto oncogene 53 NF1 gene 53 titers 53 #q#.# [001] 53 miRNA 53 HIV HCV coinfected 53 inhibin 53 CCR7 53 HLA gene 53 nitrotyrosine 53 pDC 53 genome sequences 53 gastric carcinogenesis 53 oncoproteins 53 inducible 53 granulocytes 53 proteome 53 CAG repeats 53 cynomolgus macaques 53 homologue 53 intestinal microflora 53 APOE 53 epigenetic mechanisms 53 BRCA1 mutation 53 homologues 53 spontaneous mutation 53 maternally inherited 53 TOMM# 53 dengue viruses 53 antigens 53 CD8 responses 53 protein kinases 53 human herpesvirus 53 CHIKV 53 alkaline phosphatase ALP 53 murine models 53 lymph node metastasis 53 BRCA2 mutation 53 hypervariable 53 chromosomal rearrangements 53 T2D 53 caveolin 53 ug mL 53 prognostic markers 53 JAK2 mutation 52 HPV subtypes 52 cotyledon 52 amino acid sequences 52 metagenome 52 neutralizing antibody responses 52 adenoviral 52 chromosomal aberrations 52 CYP#D# 52 cellularity 52 transactivation 52 QTL 52 S. aureus isolates 52 estrogen receptor 52 A. gambiae 52 malignant nodules 52 TIMP 1 52 superinfection 52 CD4 + CD# 52 rhizobia 52 alpha synuclein gene 52 Heterozygous 52 endophyte 52 virological response 52 phylogenetically 52 atypical hyperplasia 52 rotaviruses 52 subsp 52 antisera 52 codons 52 del 5q 52 inhibitory receptor 52 S#A# [002] 52 sialic acids 52 O methyltransferase 52 Gag polymorphisms 52 chromosome #q#.# [002] 52 immunoreactivity 52 fig. S4 52 TP# mutation 52 sorghum varieties 52 genetically 52 multidrug resistance 52 PKCi 52 BCL#A 52 ecotypes 52 susceptibility locus 52 mtDNA sequence 52 familial pancreatic cancer 52 lactase persistence 52 nucleotide 52 biochemical recurrence 52 serum albumin 52 protein isoforms 52 BRCA mutation 52 GBV C 52 morphologically 52 univariate analyzes 52 hypermethylated 52 familial ALS 52 STK# [002] 52 bone marrow stromal cells 52 HBeAg 52 serpin 52 trypanosome 52 lipoxygenase 52 lysine residues 52 monocots 52 murine 52 lymph node metastases 52 serovar 52 univariate 52 survivin 52 aminopeptidase 52 EGFR gene 52 A. flavus 52 heritable 52 ADH1B * 52 paratuberculosis 52 transcriptional activation 52 clinicopathological 52 miR 52 pg ml 52 prognostic factors 52 IgE antibodies 52 serotonin transporter 52 TCF#L# gene 52 LRRK2 gene 52 generalized vitiligo 52 P aeruginosa 52 hepatic fibrosis 52 Fig. 1B 52 lamivudine resistant 52 Bt toxin 52 adenoma 52 PCR assay 52 variants 52 FGFR1 52 eotaxin 52 cystatin C 52 TNFalpha 52 CD1d 52 causative organism 52 predictive biomarker 52 dinucleotide 52 BVDV 52 deacetylation 52 IL 1β 52 chromosome #p#.# 52 germline 52 serine 52 GNAQ 52 HCMV 52 fig. S2 52 virologic responses 52 metabolizing enzymes 52 operons 52 NY ESO 52 malarial parasites 52 antigenicity 52 splice variant 52 KRAS mutation 52 hydrolase 52 tHcy 52 cysteines 52 Lactobacillus 52 P. aeruginosa 52 isoenzyme 52 CHEK2 52 methyltransferase 52 3'UTR 52 SSc 52 Foxp3 52 trimer 52 heterologous 52 lectin 52 logistic regression analysis 52 isomerase 52 metagenomes 52 prognostically 52 lactate dehydrogenase 52 SLC#A# [001] 52 enterotypes 52 deleterious mutation 52 DGGE 52 Prochlorococcus 52 overexpressed 52 genetic determinants 52 TPMT 52 Her2/neu 52 evolutionarily conserved 52 SNCA 52 KIAA# 52 EGFP 52 antibody titres 52 S. Typhimurium 52 glycan structures 52 WNK1 52 spermidine 52 BRCA mutations 52 immunoblotting 52 HCV infection 52 bacterial pathogen 52 C. difficile toxins 52 lymphocytosis 52 vimentin 52 coding genes 52 multigenic 52 sitosterol 52 NPM1 52 immunized mice 52 phylogenetic 52 db db mice 52 odorant receptor 52 antitumor effect 52 cytosine 52 transgenic mice 52 gut microbes 52 histologic subtypes 52 overexpressing cells 52 HLA antigens 52 synteny 52 DNA methylation patterns 52 ß1 52 MDM2 52 HLA DR4 immune 52 H. pylori 52 homologous genes 52 synthases 52 nutlin 3a 52 microcephalin 52 CYP#C# [001] 52 Phytophthora sojae 52 PcG proteins 52 immunofluorescence staining 52 histologies 52 δ 52 chromosomal DNA 52 nM 52 gut microbiota 52 genomic DNA 52 ABCB1 gene 52 proviral DNA 52 serum leptin 52 Aspergillus oryzae 52 fusion protein 52 FDG uptake 52 activating mutations 52 transfection efficiency 52 gene amplification 52 phytate 52 Agrobacterium 52 glycosylated 52 NF1 52 BMP2 52 coexpression 52 provirus 52 N Myc 52 peptide sequences 52 ApoB 52 premutation 52 incomplete penetrance 52 airway responsiveness 52 BRAF V#E 52 serum vitamin D 52 bcl 2 52 HLA DR2 52 outbred 52 Typhimurium 52 Fig. 2C 52 eukaryote 52 chronic HBV 52 proteins 52 plasma lipid 52 HIV1 52 virulence determinants 52 cytogenetic 52 Brucella abortus 52 archaeal 52 UGT#B# 52 IFN γ 52 Burkholderia 52 epigenetic silencing 52 liver transplant recipients 52 mutant gene 52 ELISPOT 52 EpCAM 52 serum antibodies 52 C. perfringens