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(Click for frequent words.) 76 codons 64 nucleotide 63 dinucleotide 62 intron 61 nucleotide sequence 61 cytosine 61 guanine 60 thymine 60 ribosomal DNA 60 rRNA 60 frameshift mutation 59 tRNA synthetase 59 amino acid substitutions 59 chromosome #q# [002] 59 homologs 59 intergenic 59 polyadenylation 58 chromosome #q# [001] 58 untranslated regions 58 homologues 58 mRNAs 58 intronic 58 amino acid residues 58 tRNA 58 rs# [004] 58 polymerase 58 missense mutations 58 transmembrane domain 58 acetylation 58 exon 58 centromeric 58 orthologs 57 amino acid residue 57 RNAP 57 homodimer 57 amino acid substitution 57 adenine 57 UTRs 57 alanine 57 VNTR 57 ribosomal protein 57 indel 57 #S rRNA 57 allelic 57 PTPN# 57 histidine 57 MLL gene 57 missense 57 heterochromatic 57 valine 57 ssDNA 57 unmethylated 56 guanine G 56 homolog 56 X inactivation 56 amino acid sequence 56 telomeric 56 transferase 56 ORFs 56 tRNAs 56 transcriptional repressor 56 reverse transcriptase 56 alternatively spliced 56 nucleotides 56 RNA polymerase II 56 MSH2 56 6S RNA 56 uracil 56 mutant alleles 56 mRNA molecules 56 3' UTR 55 loci 55 endonuclease 55 Alu elements 55 H#K# [002] 55 mRNA 55 cysteines 55 beta globin 55 MTHFR gene 55 nucleotide sequences 55 noncoding 55 COL#A# 55 germline mutations 55 Fig. 1C 55 At#g# 55 genes encoding 55 amino terminal 55 heterozygous 55 hypermethylation 55 linkage disequilibrium 55 alleles 55 protein encoded 55 histone H3 55 transactivation 55 haplotype 55 thymine T 55 paralogs 55 polymorphism 55 isoleucine 55 heterochromatin 55 isotype 55 receptor gene 55 mitochondrial gene 55 amplicons 55 tetramers 55 kDa protein 54 E1A 54 fig. S2 54 helices 54 eIF4E 54 tyrosine phosphorylation 54 contigs 54 sequence homology 54 autosomal 54 polymerases 54 viral genome 54 frameshift 54 postsynaptic 54 E#F# 54 pyrimidine 54 PALB2 54 K#N 54 nucleosome 54 #q#.# [002] 54 ubiquitination 54 histone modification 54 STAT1 54 homologous recombination 54 cDNA 54 microdeletion 54 anaphase 54 mutations 54 SMN1 54 zebrafish genome 54 rs# [002] 54 proto oncogene 54 E cadherin 54 deacetylation 54 dephosphorylation 54 polypeptide 54 allelic variants 54 CpG 54 globin genes 54 heterozygotes 54 cDNA libraries 54 translocates 54 Phosphorylation 54 OCA2 gene 54 serine 54 isoform 53 disulfide bond 53 cysteine residues 53 hypervariable 53 3' 53 haplotypes 53 isoforms 53 RNA polymerase 53 dimer 53 helicase 53 H#K#me# 53 enzymatic activity 53 guanosine 53 ubiquitinated 53 RNA sequences 53 cohesin 53 transmembrane protein 53 Supplementary Fig 53 cDNAs 53 orthologous 53 chromatid 53 EGFP 53 centromere 53 exonuclease 53 glycoproteins 53 leucine zipper 53 kilobase 53 methylation 53 ectodomain 53 coding sequences 53 proapoptotic 53 antiparallel 53 #q# [002] 53 fig. S1 53 histone 53 constitutively active 53 RASSF1A 53 segmental duplications 53 MLH1 53 DNA polymerase 53 Cdc# 53 transmembrane 53 rs# [003] 53 mutation 53 gp# [002] 53 nonsynonymous 53 phosphorylates 53 mRNA transcripts 53 cytoplasmic tail 53 DSBs 53 viral RNA 53 nucleotide substitutions 53 cis regulatory 53 FMR1 gene 53 exons 53 amino acid 53 beta globin gene 53 conformational 53 chromosome #p# [001] 53 genomic instability 53 Fig. 2A 53 chromosome #q 53 CDKN2A 53 recombination 53 proteolytic cleavage 53 CFTR gene 53 site directed mutagenesis 53 OCA2 53 membrane proximal 53 Fig. 1B 53 PrP 53 biotinylated 53 codon usage 52 cytidine 52 cytosolic 52 miRNAs miR 52 amplicon 52 alpha subunit 52 amino acid alanine 52 receptor tyrosine kinase 52 indels 52 homozygotes 52 p# MAPK 52 transmembrane receptor 52 catenin 52 TSC1 52 Cre recombinase 52 RNA polymerases 52 coexpression 52 allele 52 carboxyl terminal 52 introns 52 riboswitch 52 presynaptic 52 conformational changes 52 mRNA expression 52 receptor molecule 52 Fig. 1A 52 single nucleotide polymorphism 52 intergenic regions 52 transcriptionally 52 3'UTR 52 chromosomal DNA 52 centromeres 52 promoter methylation 52 chromosomal rearrangements 52 methylated 52 V3 loop 52 mRNA translation 52 Sup# 52 Foxp3 52 mammalian organisms 52 coiled coil 52 V#F mutation 52 genes CYP#C# 52 iNOS 52 tumor suppressor p# 52 centrosome 52 chromosomal 52 dsDNA 52 pRb 52 polymorphisms 52 serine threonine kinase 52 trinucleotide 52 thymidine 52 hexamer 52 RecA 52 gene encoding 52 cytokeratin 52 TFIIH 52 SLC#A# [001] 52 NHEJ 52 MECP2 gene 52 colocalization 52 RNA strand 52 FGFR2 52 HBx 52 Cx# [001] 52 transgene expression 52 phosphatidylinositol 52 rDNA 52 Jhdm2a 52 matK 52 D. melanogaster 52 K#R [002] 52 phosphorylate 52 homologous chromosomes 52 Fig. 1E 52 hTERT 52 chromatin structure 52 Hh 52 antibody antigen 52 substrate specificity 52 mRNA molecule 52 meiotic recombination 52 amino acid valine 51 immunodominant 51 KIAA# 51 insertion deletion 51 NF1 gene 51 constitutively expressed 51 Fig. 2C 51 immunoglobulin genes 51 evolutionarily conserved 51 polymorphic 51 overexpressing 51 H#K# [001] 51 tetramer 51 RNA molecule 51 thrombospondin 51 extracellular domain 51 germline 51 virulence genes 51 WNK1 51 gene locus 51 EZH2 51 lysates 51 RCAN1 51 miRNA genes 51 oligomer 51 carboxy terminal 51 phosphorothioate 51 ESR1 51 APOBEC3G 51 env gene 51 intracellular signaling 51 melanocyte 51 epigenetic silencing 51 alpha synuclein gene 51 actin binding 51 decarboxylase 51 homodimers 51 epistasis 51 paternally inherited 51 nuclease 51 cells transfected 51 nucleotide bases 51 MnSOD 51 C#BL/#J 51 replicase 51 operon 51 RAD# [001] 51 messenger RNAs 51 chromosomal regions 51 MTHFR 51 FLT3 kinase 51 glyceraldehyde 3 51 mutational 51 RhoA 51 TOP2A gene 51 PAK1 51 DNA polymerases 51 RNA splicing 51 DNA sequences 51 COOH terminal 51 #p#.# [001] 51 GNAQ 51 homologous 51 dimeric 51 ribosomal 51 haemagglutinin 51 MALAT1 51 noncoding regions 51 epitope 51 phosphorylated 51 endonucleases 51 kDa 51 overexpressing cells 51 histone H4 51 C#Y 51 ribozyme 51 IL#B 51 cytochrome 51 methyltransferase 51 DR4 51 phosphorylation 51 downregulation 51 transfer RNA tRNA 51 homologue 51 fluorescence intensity 51 nonsense mutation 51 ectopic expression 51 bases adenine 51 cytochrome b 51 proline rich 51 uPAR 51 TERT 51 homozygosity 51 GAPDH 51 Fig. 3a 51 mitogen activated protein kinase 51 Fig. 3B 51 BARD1 51 BCR ABL1 51 subcellular localization 51 PAX5 51 cysteine 51 somatic mutations 51 chromosome 51 c myc 51 cyclin B1 51 demethylase 51 hypermethylated 51 murine 51 epitopes 51 Prox1 51 phenotype 51 H#K# methylation 51 ligand 51 R#W [002] 51 subunit 51 differentially expressed genes 51 lysine residues 51 ERBB2 51 antigenic 51 BMAL1 51 cytokinesis 50 GTPase 50 immunoblotting 50 IGF2 50 PCR amplified 50 immunofluorescence 50 alpha helix 50 transgene 50 polyglutamine 50 EBNA1 50 PON1 50 leukemic cell 50 somatic mutation 50 DNMT1 50 chromosomes 50 ultraconserved elements 50 cadherin 50 HepG2 cells 50 functional polymorphism 50 phospho 50 TET2 50 homology 50 K ras mutations 50 globin 50 LRAT 50 Gag protein 50 astrocytic 50 MDM2 50 protein p# 50 CD#c 50 #S rRNA gene 50 pairwise 50 Fig. 3b 50 ploidy 50 FMR1 50 Fig. 1D 50 microcephalin 50 Phylogenetic analysis 50 CGG repeats 50 A. thaliana 50 polypeptides 50 UGT#B# 50 5 hydroxymethylcytosine 50 Gly 50 ubiquitylation 50 KaiC 50 morphogen 50 NOTCH1 50 DNA demethylation 50 PTEN gene 50 metaphase 50 Hemagglutinin 50 glycosylated 50 hnRNP 50 tRNA genes 50 #p# [003] 50 adenylate cyclase 50 SNP rs# [001] 50 Cyclin D1 50 heterodimers 50 MYBPC3 50 hyperactivation 50 5 methylcytosine 50 ribonuclease 50 CHD5 50 adherens junctions 50 coding exons 50 RUNX3 50 glycan 50 X chromosome 50 JAK STAT 50 transcription elongation 50 Amino acid 50 huntingtin 50 TRAF6 50 differentially regulated 50 threonine 50 Vps# 50 Sanger sequencing 50 VKORC1 50 genetic recombination 50 EphB4 50 glycosylation 50 gene rearrangements 50 pyrrolysine 50 LPA gene 50 tyrosine kinase receptor 50 μg ml 50 chromosome #q#.# [002] 50 protein phosphorylation 50 β1 50 diploid 50 ubiquitin ligase 50 MDCK cells 50 viral genomes 50 CNTNAP2 50 presenilin 50 PER2 50 insertions deletions 50 Arabidopsis genome 50 telomere DNA 50 ligase 50 chromosome #q#.# [001] 50 bacterial genomes 50 CREBBP 50 transcriptional activation 50 autosomes 50 homozygote 50 protein coding 50 variant allele 50 dimerization 50 #BP# 50 chromosome segregation 50 Fig. 1c 50 KCNQ1 50 Ser# 50 ribosomal proteins 50 SOCS3 50 chromosome #p#.# 50 DLC1 50 nucleoli 50 transcriptomes 50 heterozygosity 50 protein conformation 50 serine protease 50 lacZ 50 multivariate Cox 50 synthases 50 encodes protein 50 Nf1 50 chromosomal translocation 50 phospholipid 50 D#G 50 Chk1 50 coding genes 50 heterozygote 50 chromosomal aberrations 50 coactivator 49 mosaicism 49 MAPK pathway 49 immunoreactive 49 Heterozygous 49 serine threonine 49 genomic DNA 49 Vpu 49 DNA glycosylase 49 PTEN phosphatase 49 mutant gene 49 tumor suppressor genes 49 HLA alleles 49 phenotypically 49 CD1d 49 MEK1 49 major histocompatibility complex 49 ligand receptor 49 meiotic 49 sister chromatid 49 histone protein 49 synuclein 49 eukaryotic 49 σ 49 receptor kinase 49 MyoD 49 heterodimer 49 methylated DNA 49 genetic loci 49 KLF4 49 cytoplasmic 49 caveolin 49 SRY gene 49 mesoderm 49 KCNE2 49 protein tyrosine phosphatase 49 metabolic enzymes 49 polyploid 49 microsatellite instability 49 c KIT 49 transgenic mice expressing 49 spontaneous mutation 49 Fig. 2b 49 histone modifications 49 D#N 49 archaeal 49 #q# [001] 49 biogenesis 49 tumor suppressor gene 49 #p#.# [002] 49 nucleases 49 isotypes 49 p# protein 49 ncRNA 49 gp# [001] 49 recombinase 49 monophyletic 49 cystic fibrosis transmembrane conductance 49 SLITRK1 49 FLT3 49 TCF#L# gene 49 histone proteins 49 SNPs 49 budding yeast 49 frataxin gene 49 antisense oligonucleotides 49 kilobases 49 ciliated 49 PDZ domains 49 GenBank accession 49 S. cerevisiae 49 CDH1 49 transcriptional activity 49 eIF2 49 C#BL 6 49 APOC3 49 tetragonal 49 androgen receptor gene 49 messenger RNA mRNA 49 Chromosomes 49 #q#.# [001] 49 proteolysis 49 PB1 49 gene loci 49 hemagglutinin HA 49 primate genomes 49 sister chromatids 49 ZNF# 49 ribosomal RNA 49 fig. S4 49 miRNA expression 49 HLA genes 49 TP# gene 49 receptor ligand 49 chemokine receptor 49 leptin receptor 49 receptor subunits 49 missense mutation 49 RNase H 49 #p# [001] 49 chaperone proteins 49 previously uncharacterized 49 antigen binding 49 antisense RNA 49 Methylation 49 ankyrin 49 DNA methylation 49 constitutively 49 Smad3 49 Htt 49 organism genome 49 SEQ ID 49 activating mutation 49 mPGES 1 49 glycoprotein 49 gene inactivation 49 splice junctions 49 CpG islands 49 PIP3 49 messenger RNA 49 activating mutations 49 monocyte 49 HipA 49 Eq. 49 hemagglutinin gene 49 telomere 49 var genes 49 maternally inherited 49 BMP signaling 49 Taq DNA 49 Fig. 2a 49 CHD7 49 splice variants 49 #S rRNA genes 49 operons 49 Fig. 1a 49 CTL epitopes 49 Rad# 49 Rap1 48 blastomeres 48 downstream effectors 48 junctional 48 beta subunit 48 cathepsin B 48 SOD1 48 rs# [001] 48 MC4R 48 fibronectin 48 LIS1 48 RNA binding 48 H#Y 48 capsid protein 48 transcriptional activator 48 stilbene 48 colorectal carcinoma 48 transfected cells 48 rRNA genes 48 CAG repeats 48 downregulated 48 karyotype 48 immunohistochemical 48 Drosha 48 genotypes 48 recombination hotspots 48 FGFR3 48 beta galactosidase 48 HAR1 48 aggrecan 48 isogenic 48 Fig. 3A 48 tyrosine kinase 48 HERV 48 CYP#C# [002] 48 nucleolar 48 BMP2 48 λ 48 protein isoforms 48 CYP#D# gene 48 metaplasia 48 IgG1 48 GSK 3ß 48 gene transcription 48 CCL#L# 48 lectin 48 plastids 48 thioredoxin 48 CFTR cystic fibrosis transmembrane 48 epoxide 48 Aβ 48 endoplasmic reticulum 48 fluorescent molecule 48 prion proteins 48 ortholog 48 epigenetic alterations 48 #S rDNA 48 gene amplification 48 AMACR 48 Vangl2 48 genetic alterations 48 IgA deficiency 48 JAK2 48 proline 48 subunits 48 radial glia 48 kinase gene 48 pyruvate kinase 48 Fig. 2c 48 HER2 receptor 48 transcriptional regulator 48 Fig. 4a 48 orthologous genes 48 centrosomes 48 constitutively activated 48 overexpressed 48 oxytocin receptor 48 methylenetetrahydrofolate reductase 48 Fig. 2B 48 bacterial genome 48 synteny 48 kinase domain 48 CTCF 48 glycogen synthase kinase 48 DNA ligase 48 BAC clones 48 mutant proteins 48 BDNF gene 48 oligomerization 48 ERK2 48 aneuploid 48 IRAK1 48 huntingtin protein 48 PCR amplification 48 chloroplast 48 protein phosphatase 48 Golgi apparatus 48 isoenzyme 48 VHL gene 48 clade C 48 SCN5A 48 SLC#A# gene [001] 48 non coding RNA 48 Immunohistochemical analysis 48 HMGA2 48 plastid 48 IKKa 48 translocations 48 C1q 48 autosomal dominant 48 mitotic spindle 48 gene 48 κ 48 wildtype 48 haploid 48 ephrin 48 nucleic acid molecules 48 oscillatory 48 XPB 48 bisulfite sequencing 48 odorant receptor 48 IGF1R 48 tumor suppressor protein 48 NS3 48 CHEK2 48 pre mRNA splicing 48 5 hmC 48 dystrophin gene 48 TAp# 48 CRISPR 48 amino acid glutamine 48 chromatogram 48 Arabidopsis thaliana 48 protein subunits 48 forkhead 48 exocytosis 48 telomeric DNA 48 proteins 48 metazoan 48 APOL1 48 phospholipase 48 immunoreactivity 48 cytosine methylation 48 catalytic subunit 48 transduced 48 syngeneic 48 RFLP 48 transposable element 48 transcriptional machinery 48 transcriptome sequencing 48 PON1 gene 48 BRAF gene 48 p# NTR 48 TRF1 48 anterior pituitary 48 Skp2 48 Activating mutations 48 MMP9 48 HLA B# 48 HCMV 48 PICALM 48 clade B 48 HER2 HER2 48 oncoprotein 48 synapsis 48 ^ sup #m 48 matrix metalloproteinase 48 Hsp# [001] 48 mutated K ras 48 agouti gene 48 CYP# [002] 48 causal variants 48 transfected 48 Arp2 3 48 TMPRSS2 ERG 48 Mre# 48 CYP#D# 48 Trypanosoma brucei 48 mitotic spindles 48 apo AI 48 PTP1B 48 transcriptional regulation 48 Ubx 48 fig. 48 quantitative trait loci 48 homologous genes 48 Aß 48 condensin 48 estrogen receptor 48 spliceosome 48 KLF# 48 yeast genome 48 ncRNAs 48 TACI 48 unmutated 48 immunological synapse 48 concatenated 48 CEACAM1 48 ligand binding 48 hexamers 48 CD8 + 48 cofilin 48 TRIM5 48 RAS RAF MEK 48 positional cloning 48 loxP 47 deleterious mutations 47 X chromosome inactivation 47 COX2 47 receptor protein 47 ALK gene 47 fig. S6 47 nucleotide substitution 47 lamin 47 MHC molecules 47 protein fragment 47 Single Nucleotide Polymorphisms SNPs 47 oligomeric 47 survivin 47 conserved sequences 47 caveolin 1 47 adipogenic 47 Agrobacterium 47 flagellar 47 cyclin D1 47 cilium 47 retrotransposon 47 mRNA decay 47 LRP6 47 ω 47 regulator CFTR gene 47 centrioles 47 PIP2 47 occludin 47 epigenetic modifications 47 myosin 47 ABCB1 47 transient transfection 47 overexpression 47 phosphatases 47 cM 47 dimers 47 rs# rs# 47 MLL2 47 bcl 2 47 genome rearrangements 47 Clusterin 47 microRNAs miRNAs 47 FUS1 47 mutant allele 47 aromatase 47 NFKBIA 47 cytochrome c oxidase 47 enolase 47 oncogenic transformation 47 succinate dehydrogenase 47 HDACs 47 antisense oligonucleotide 47 costimulatory molecules 47 HbF 47 Chromosome 47 SVs 47 TIMP 1 47 methylation patterns 47 HLA DRB1 47 KRAS oncogene 47 CpG island 47 klotho 47 CYP#B# 47 chloroplast genome 47 ChIP seq 47 clonally 47 oligo 47 effector 47 cyclin 47 antisense strand 47 defensin 47 X. laevis 47 GSTP1 47 NR#A# 47 demethylation 47 MIF protein 47 heterozygosity LOH 47 DNA methyltransferase 47 microRNA molecules 47 PrPSc 47 palindromic 47 NKX#.# 47 synthase 47 maize genome 47 genetic polymorphism 47 epigenetic modification 47 apolipoprotein E gene 47 poxvirus 47 BCR ABL 47 transposable elements 47 JAK2 gene 47 pseudogenes 47 figs.