Related by context. All words. (Click for frequent words.) 70 variant allele 70 heterozygosity 70 orthologs 69 #S rRNA 69 PTPN# 69 mRNA expression 68 allele frequencies 68 H#K#me# 68 TMPRSS2 ERG fusion 68 functional polymorphism 68 somatic mutation 67 #S rDNA 67 VNTR 67 genetic loci 67 heterozygotes 67 linkage disequilibrium 67 ABCB1 67 #S rRNA gene 66 monozygotic twins 66 subcellular localization 66 miRNA expression 66 mRNA transcripts 66 fluorescence intensity 66 transgene expression 66 array CGH 66 karyotype 66 polymorphisms 66 intronic 66 MSH2 66 genotypic 65 quantitative trait loci 65 COL#A# 65 intergenic 65 qRT PCR 65 single nucleotide polymorphism 65 #p#.# [001] 65 microRNA expression 65 cytokeratin 65 rs# [004] 65 #q#.# [001] 65 gene polymorphisms 65 clinicopathological 65 gene loci 65 genomewide 65 chromosomal regions 65 nucleotide 65 paternally inherited 65 chromosomal aberrations 65 alleles 65 autosomal 65 dinucleotide 65 haplotypes 65 rs# [002] 65 gene amplification 65 #q#.# [002] 65 heterozygosity LOH 65 APOC3 65 indel 65 QTLs 65 Supplementary Table 64 morphologic 64 TMPRSS2 ERG 64 differential gene expression 64 indels 64 somatic mutations 64 epistasis 64 nucleotide substitutions 64 alternatively spliced 64 splice junctions 64 splice variants 64 paralogs 64 Jhdm2a 64 SNP rs# [002] 64 UGT#A# * 64 genes encoding 64 nucleic acid sequence 64 PALB2 64 nucleotide sequence 64 substrate specificity 64 cytochrome b 64 number variation CNV 64 rs# [001] 64 microsatellite instability 64 homozygosity 64 chromosome #q# [002] 64 CYP#D# gene 64 sequence homology 64 monozygotic 64 APOE genotype 64 UGT#B# 64 missense mutations 64 P cadherin 64 logistic regression analyzes 64 chromosome #q# [001] 64 Fig. 3b 64 RRM1 64 SNP rs# [001] 64 mtDNA 63 germline mutations 63 allele frequency 63 TOP2A gene 63 insertions deletions 63 A. thaliana 63 aneuploidy 63 immunostaining 63 VKORC1 63 MLH1 63 differentially expressed genes 63 mitochondrial DNA mtDNA 63 multigenic 63 methylated DNA 63 unmethylated 63 Haplotype 63 orthologous genes 63 mutant allele 63 CYP#C# [002] 63 transcriptional regulation 63 TOP2A 63 immunoreactive 63 BDNF gene 63 phenotypic 63 methylation patterns 63 genomic loci 63 thyroglobulin 63 carcinoembryonic antigen 63 coding sequences 63 CCL#L# 63 rRNA 63 IgG antibody 63 cis regulatory 63 immunohistochemical 63 gene duplications 63 glutamic acid decarboxylase 63 gene locus 63 promoter methylation 63 ADRB2 63 multiple logistic regression 63 #p# [003] 63 germline 63 fig. S4 63 polymorphism 63 PCR amplified 63 multivariable analysis 63 gene rearrangements 63 #q# [001] 63 ORFs 63 multivariate analyzes 63 IL#B 63 segmental duplications 63 chromosome #p#.# 63 virulence genes 63 PON1 63 Histologic 62 Polymorphism 62 KIAA# 62 ZNF# 62 nitrotyrosine 62 HER2 expression 62 loci 62 EBNA1 62 FMR1 62 aggrecan 62 MTHFR 62 Chromosomal 62 Cytogenetic 62 transgenic mice expressing 62 histopathological 62 missense 62 apolipoprotein B 62 polygenic 62 amplicon 62 heterozygous 62 trinucleotide 62 Phenotypic 62 quantitative PCR 62 inhibin B 62 PTEN gene 62 histologic 62 major histocompatibility complex 62 DNA methylation patterns 62 Clusterin 62 plasma lipid 62 apolipoproteins 62 HLA DQ2 62 cDNA libraries 62 antibody antigen 62 At#g# 62 NFKBIA 62 binding affinities 62 cyclin E 62 microdeletions 62 Amino acid 62 orthologous 62 Genotypic 62 RT qPCR 62 CFTR gene 62 HFE gene 62 gene expression 62 constitutively expressed 62 microsatellite markers 62 phylogenetic analyzes 62 phenotypic variation 62 familial clustering 62 intergenic regions 62 Immunohistochemical 62 SLC#A# [002] 62 allelic variants 62 HepG2 cells 62 Supplementary Fig 62 ANOVA 62 p tau 62 interobserver 62 NF1 gene 62 histone modifications 62 intact parathyroid hormone 62 LPA gene 62 K#N 62 MTHFR gene 62 isoforms 62 chromosomal rearrangements 62 RASSF1A 61 chromosomal deletions 61 Immunohistochemical analysis 61 serum antibodies 61 5 HTTLPR 61 ChIP Seq 61 laterality 61 lactate dehydrogenase 61 multivariate Cox 61 PCR RFLP 61 logistic regression analysis 61 CHI#L# 61 ESR1 61 amplicons 61 SHANK3 61 Multivariate analysis 61 #q# [002] 61 etiologic 61 intron 61 receptor gene 61 valine 61 TT genotype 61 rs# [003] 61 microdeletion 61 mRNA molecules 61 GSTT1 61 codon usage 61 mutant alleles 61 insertion deletion 61 immunodominant 61 seropositivity 61 eIF4E 61 EGFR gene 61 mitochondrial gene 61 Immunohistochemistry 61 BCL#A 61 immunohistochemical analysis 61 vimentin 61 phenotype 61 chromosome #q#.# [002] 61 uniparental 61 QTL 61 Genetic variation 61 PCR assay 61 bacterial genomes 61 C#Y 61 nucleotide substitution 61 microRNAs miRNAs 61 methyltransferase 61 CYP#B# 61 TSC1 61 extracellular domains 61 haematopoietic 61 chromosomal 61 Western blotting 61 intraobserver 61 cellularity 61 methylenetetrahydrofolate reductase 61 CHD7 61 endonuclease 61 Polymorphisms 61 causative mutations 61 serum BDNF 61 homozygotes 61 CDKN2A 61 SLC#A# [001] 61 immunoreactivity 61 dimeric 61 V3 loop 61 ERalpha 61 inhibin 61 metaplasia 61 APOE e4 61 dopamine transporter gene 61 TP# mutations 61 GAPDH 61 S. cerevisiae 61 CD#b 61 familial aggregation 61 immunofluorescent 61 histological subtype 61 chromosomal rearrangement 61 chromosome #q#.# [001] 61 genetic polymorphisms 61 neoplastic 61 Arabidopsis genes 61 cytopathic 61 Fig. 3a 61 STAT4 61 proapoptotic 61 chromosome #q 61 uPAR 61 proteoglycan 61 cDNA 61 immunohistochemical staining 61 #S rRNA genes 61 histone acetylation 61 miR #a [001] 61 deacetylation 61 PON1 gene 61 clinico pathological 61 GSTP1 61 MMP# 61 penetrance 61 FGFR2 61 SDS PAGE 61 coexpression 60 haplotype 60 hypermethylation 60 MYH9 gene 60 cathepsin B 60 #p#.# [002] 60 Univariate 60 histone modification 60 transcriptome 60 replicase 60 ploidy 60 bivariate 60 DGGE 60 fig. S1 60 CD1d 60 polyadenylation 60 transmembrane protein 60 recombination hotspots 60 HLA DRB1 60 CNVs 60 protein isoforms 60 ADAMTS# 60 RNA Seq 60 glycosyltransferase 60 unmethylated DNA 60 constitutively 60 MDRD 60 protein tyrosine phosphatase 60 HER2 gene 60 untranslated regions 60 genes CYP#C# 60 transmembrane 60 phenotypic expression 60 #p# [001] 60 maternally inherited 60 glycosylation 60 Ki# 60 chromosome #p# [002] 60 binding affinity 60 TTR gene 60 aneuploid 60 CC genotype 60 DQB1 * 60 E#F# 60 monogenic 60 κ 60 mutational analysis 60 glomerular 60 neutralizing antibody 60 MDR1 60 histopathologic 60 HRCT 60 gene deletions 60 parasitaemia 60 fractional anisotropy 60 TIMP 60 cystatin C 60 plasma pharmacokinetics 60 SMAD4 60 subcellular 60 genotype phenotype 60 evolutionarily conserved 60 HLA DRB1 * 60 linkage disequilibrium LD 60 transcriptome sequencing 60 K ras mutations 60 Alternative splicing 60 Gram stain 60 LRP5 60 tyrosine phosphorylation 60 #ß 60 genetic polymorphism 60 hippocampal neurons 60 microvessel density 60 aCGH 60 p# mutation 60 nonparametric 60 steroidogenic 60 ultrastructural 60 metabolomic profiles 60 CEACAM1 60 Leydig cell 60 miRs 60 lymph node metastasis 60 SOD2 60 autosomes 60 S#A# [002] 60 mosaicism 60 meta analytic 60 β1 60 chromosome #p# [001] 60 Alu elements 60 allele 60 hierarchical clustering 60 de novo mutations 60 microsomal 60 lesional 60 p# activation 60 pathogenic mutations 60 neuroligins 60 beta subunit 60 CNTNAP2 60 hypermethylated 60 HbF 60 replicon 60 microglial 60 Fig. 1E 60 HOTAIR 60 human leukocyte antigens 60 CD#c 60 5 methylcytosine 60 isotype 60 interobserver reliability 59 thyrotropin 59 EGFP 59 serine protease 59 TNFR1 59 tumorigenicity 59 protein encoded 59 operon 59 quasispecies 59 leptin receptor 59 drug metabolizing enzymes 59 PIK3CA 59 HMGA2 59 HLA DR 59 HIV RNA 59 Descriptive statistics 59 anterior pituitary 59 apoE 59 MECP2 gene 59 ABCB1 gene 59 gene expression patterns 59 thyroid peroxidase 59 noncoding RNA 59 ERCC1 59 heritable traits 59 variant alleles 59 epithelial cell 59 transcriptional regulator 59 apolipoprotein E gene 59 correlation coefficients 59 phylogenetically 59 gene polymorphism 59 RT PCR assay 59 metabolite concentrations 59 homologous 59 gDNA 59 allelic variation 59 ribosomal protein 59 genomic alterations 59 glycan 59 cDNAs 59 stereochemical 59 cell adhesion molecule 59 Foxp3 59 primate genomes 59 Fig. 2a 59 RAR beta 59 ERBB2 59 alanine aminotransferase ALT 59 nucleotide sequences 59 Wwox 59 TGF ß 59 NOD mouse 59 immunofluorescence 59 5 hmC 59 annexin V 59 genomic DNA 59 amino acid sequence 59 chromatin immunoprecipitation ChIP 59 exon 59 CagA 59 HIF 1alpha 59 confidence intervals CIs 59 APOL1 59 kidney allograft 59 susceptibility loci 59 gene expression microarrays 59 independent prognostic marker 59 SNPs pronounced snips 59 plasma leptin 59 chromosome condensation 59 intestinal microflora 59 Fig. 1a 59 ligand receptor 59 rDNA 59 leiomyoma 59 VEGFR1 59 isoenzymes 59 Bonferroni correction 59 bivariate analysis 59 hamartomas 59 variant rs# 59 transcriptomes 59 EF Tu 59 deleterious mutations 59 immunoblotting 59 C#BL/#J 59 SSc 59 pseudogenes 59 colocalization 59 X chromosome inactivation 59 LIS1 59 KLF4 59 3' UTR 59 Alleles 59 protein conformation 59 SMN2 gene 59 adipogenic 59 ANCOVA 59 p# mutations 59 abdominal adiposity 59 CYP#D# 59 eosinophil count 59 postsynaptic 59 membrane proximal 59 karyotypes 59 K#R [002] 59 PCa 59 tetramer 59 Germline 59 nucleolar 59 epididymal 59 clinicopathological features 59 hepatocellular carcinomas 59 Sanger sequencing 59 dsDNA 59 ribosomal RNA 59 lysine residues 59 rs# rs# 59 tryptase 59 HMGA1 59 mtDNA mutations 59 #β HSD1 59 GABAB receptors 59 analyte 59 c Myb 59 transferase 59 nNOS 59 Histopathologic 59 serum albumin 59 germline mutation 59 perilipin 59 TCF#L# 59 proteomic analysis 59 proband 59 Prox1 59 D. melanogaster 59 Fas ligand 59 IgG4 59 androgen receptor gene 59 CYP#A# [002] 59 beta actin 59 AMACR 59 homology 59 capsular polysaccharide 59 FKBP# 59 breast carcinomas 59 prostatic 59 #q# deletion 59 epistatic 59 PFGE 59 alexithymia 59 uracil 59 MYH9 59 3'UTR 59 homodimer 59 synuclein 59 CCR5 delta# 59 heterochromatic 59 ontogenetic 59 alkaline phosphatase 59 WNK1 59 methylation 59 proto oncogene 59 scintigraphic 59 covariate 59 phenotypically 59 chemosensitivity 59 biochemical abnormalities 59 chromatin structure 59 constitutively active 59 polynucleotide 59 TCF#L# gene 59 serum PTH 59 univariate analyzes 59 IgA deficiency 59 MTT assay 59 C. neoformans 59 DNMT1 59 echogenicity 59 array comparative genomic 59 Transcriptome 59 CAG repeats 59 proteolytic 59 transcriptomic 59 TMEM#B 59 GABRA2 58 caveolin 58 forkhead 58 wildtype 58 luminal 58 logistic regression model 58 cytosolic 58 phylogenetic 58 clinicopathologic 58 Her2 gene 58 Fig. 1D 58 segmental duplication 58 eotaxin 58 explanatory variables 58 isoenzyme 58 CpG 58 mutated K ras 58 operons 58 immunoglobulin G 58 sFlt 1 58 MT1 MMP 58 striated muscle 58 immunofluorescence microscopy 58 apo AI 58 β amyloid 58 VHL gene 58 hydroxylase 58 cerebellar 58 colorectal tumor 58 ortholog 58 archaeal 58 MnSOD 58 immunocytochemistry 58 Morphological 58 triacylglycerol 58 microvessel 58 epigenetic markers 58 univariate 58 coding genes 58 airway responsiveness 58 VE cadherin 58 mammographic density 58 HLA alleles 58 IGFBP 58 gp# protein [002] 58 amino acid residues 58 phenotypes 58 missense mutation 58 heterologous 58 human leukocyte antigen 58 thermodynamic stability 58 inherited mutations 58 retinol binding protein 58 C#T [002] 58 serologic 58 urothelial 58 quantitative reverse transcriptase 58 RUNX3 58 myeloperoxidase 58 ApoE gene 58 proteolysis 58 aneuploidies 58 ^ sup #m 58 PRNP 58 μmol L 58 transcription elongation 58 MDCK cells 58 histologic subtypes 58 HLA B# 58 beta globin 58 alpha synuclein protein 58 HCV replicon 58 logistic regressions 58 Supplemental Figure 58 tRNA synthetase 58 proteolytic activity 58 ncRNAs 58 plasma adiponectin 58 covariance 58 TIMP 1 58 progesterone receptor PR 58 epithelial markers 58 Phylogenetic analysis 58 Annexin V 58 HLA antigens 58 apolipoprotein A1 58 proximal tubule 58 kDa protein 58 p# Shc 58 dizygotic twins 58 NAT2 58 cysteines 58 p# p# 58 cM 58 comparative genomic hybridization 58 figs. 58 Upregulation 58 HBeAg 58 C1q 58 N. gonorrhoeae 58 chromatogram 58 heterologous expression 58 SCr 58 interferon γ 58 meiotic recombination 58 Lp lipoprotein 58 iNOS 58 DNA demethylation 58 serum ferritin 58 PDGFR 58 p#Kip# 58 serum leptin 58 catechol O methyltransferase 58 D#N 58 Single Nucleotide Polymorphisms SNPs 58 #β estradiol 58 IL 1ß 58 convergent validity 58 UGT#A# 58 carotid artery thickness 58 prostate cancer CaP 58 Lp PLA 2 58 dizygotic 58 IGF2 58 Pearson correlation coefficient 58 spontaneous mutations 58 ribosomal proteins 58 Immunohistochemical staining 58 pairwise 58 gastric cardia 58 V#F mutation 58 SNPs 58 centromeric 58 assay detects 58 antigenic 58 cTnI 58 5 hydroxymethylcytosine 58 histologic subtype 58 S. pombe 58 HLA G 58 apo B 58 CD# expression [002] 58 promoter polymorphism 58 epithelial tumors 58 Rap1 58 cells transfected 58 σ 58 FGFR3 58 2D 4D 58 chi squared 58 PAX5 58 serum lipid 58 inbred strains 58 R#W [002] 58 homodimers 58 multigene 58 proline rich 58 breast cancer subtypes 58 Kir#.# 58 transduced 58 p# MAPK 58 genotype 58 mediated inhibition 58 Dysregulation 58 inorganic phosphate 58 histocompatibility 58 epigenetic modifications 58 antibody titer 58 ribosomal DNA 58 transfected 58 Fig. 1A 58 amino terminal 58 1alpha 58 NNRTI resistance 58 imprinted genes 58 serum concentrations 58 posttranslational modifications 58 PB1 F2 58 KRAS oncogene 58 subcellular compartments 58 univariate analysis 58 UTRs 58 t# c# CLA 58 carotid plaque 58 alanine aminotransferase 58 differentially regulated 58 C telopeptide 58 MHC molecules 58 HAAH 58 frameshift mutation 58 RNFL thickness 58 lymphovascular invasion 58 IFN γ 58 Fig. 2A 58 melanocyte 58 haplogroups 58 TNFalpha 58 ventricular myocardium 58 inducible nitric oxide synthase 58 IgG1 58 monocyte 58 mRNA decay 58 suppressor gene 58 logistic regression 58 genomic variation 58 endophenotypes 58 homologues 58 Fc receptor 58 downregulation 58 observable traits 58 centrosome 58 FGFs 58 prion gene 58 renal cysts 58 H#Y 58 CDH1 58 coding exons 58 S nitrosylation 58 carboxyl terminal 58 ssDNA 58 odds ratios ORs 58 HER2 overexpression 58 fraternal twin pairs 58 MSH6 58 estrogen receptor alpha 58 autosomal recessive 58 transfected cells 58 gene encoding 58 genotypes 58 RFLP 58 semiquantitative 58 Microarray analysis 58 serum retinol 58 situ hybridization 58 occludin 58 genes predisposing 58 Histological 58 Cyclin E 58 MMP9 58 thyrotropin levels 58 Prevotella 58 CYP #D# 58 Heterogeneity 58 SLC#A# gene [001] 58 kDa 58 IL#R 58 SOCS3 57 activating mutations 57 mitochondrial proteins 57 gene inactivation 57 PTEN protein 57 Fig. 1C 57 alternative splicing 57 C. albicans 57 homozygote 57 Linear regression 57 phosphoprotein 57 inhibitory receptor 57 FUS1 57 RCAN1 57 aT cell 57 cystatin 57 CD# + [001] 57 E selectin 57 Drosha 57 immunohistochemistry IHC 57 CNTNAP2 gene 57 endothelial activation 57 aminotransferase 57 ALK mutations 57 proteomes 57 GLUT1 57 inactivating mutations 57 telomeric 57 G allele 57 beta globin gene 57 chromosomal alterations 57 clusterin 57 SRY gene 57 IgE antibody 57 HLA B 57 Mantel Haenszel 57 FGFR2 gene 57 cytologic 57 FasL 57 Phylogenetic 57 SOX9 57 Angiotensin converting enzyme 57 Treg cell 57 microstructural 57 outer membrane proteins 57 genetic relatedness 57 PCA3 gene 57 sensitivity specificity 57 dorsal root ganglion 57 susceptibility gene 57 plasma lipoprotein 57 tocopherol 57 chromosomal DNA 57 CpG island 57 HER2 receptor 57 pleiotropic 57 HIV tropism 57 sporadic ALS 57 upregulates 57 MYBPC3 57 isoprostane 57 lincRNA 57 CYP# [002] 57 clade B 57 amino acid substitutions 57 hepatic lipase 57 lactate dehydrogenase LDH 57 c KIT 57 ω 57 N glycan 57 hydroxyproline 57 mRNAs 57 extracellular domain 57 causal variants 57 chloride secretion 57 adipocyte 57 Cathepsin B 57 site directed mutagenesis 57 heritable variation 57 transcriptional repressor 57 enteroviral 57 CIN2 + 57 lymphoid 57 rCBF 57 γ secretase 57 alpha synuclein gene 57 susceptibility locus 57 cytoplasmic tail 57 astrocytic 57 serum HBV DNA 57 micro RNA 57 syngeneic 57 NRTI resistance 57 meiotic 57 somatostatin 57 CYP#C# gene 57 μg ml 57 SOD1 gene 57 transcriptionally 57 C. pneumoniae 57 c Src 57 OPRM1 gene 57 ERK signaling 57 Fig. 2C 57 unmutated 57 catenin 57 ciliated 57 chromosomal instability 57 kilobase 57 microarray experiments 57 premorbid 57 activating mutation 57 cell lysates 57 visceral adiposity 57 nucleated cells 57 miRNAs miR 57 cytogenetic 57 CHEK2 57 5q 57 P2X 57 enolase 57 hepatoma 57 receptor subtypes 57 mucinous 57 miRNA 57 E3 ubiquitin ligase 57 non coding RNA 57 enzymatic activity 57 Mendelian